Pairwise Alignments

Query, 347 a.a., Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 315 a.a., ABC transporter substrate-binding protein from Ralstonia sp. UNC404CL21Col

 Score = 74.3 bits (181), Expect = 4e-18
 Identities = 64/285 (22%), Positives = 121/285 (42%), Gaps = 5/285 (1%)

Query: 15  MIALLTAFGLASAAMTVQAAERIAFIPKLVGVGFFTSGGNGAQEA-GKALGIDVTYDGPT 73
           ++A++ A     +A    A   IA I K     ++ +   GA  A G A G  +T+ GP 
Sbjct: 6   VLAVVAATCALFSAYAQAAGGEIAVIVKSANSNYWQNVQKGATAAMGNAKGYTMTFQGPA 65

Query: 74  -EPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSDTKPECRS 132
            E +++ +V +V N VN+    I+++   PD L PA+K+A +  + ++  DS      + 
Sbjct: 66  AESAIADEVNMVENAVNRHVAGIVLAPSDPDALVPAMKKAWEAHIPVVLIDSMVSDSGKQ 125

Query: 133 YYIN-QGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQEHPG 191
           YY +   T       L   A      +  K+A     P    +   V   + K  + H  
Sbjct: 126 YYQSFLSTDNTKAGELCAKAMIDAVGQTGKIAIMSYVPGAGSEIGRVGGFR-KYIETHSK 184

Query: 192 WEIVTTQFGYNDATKSLQTAEGIIKAYPDLDAII-APDANALPAAAQAAENLKRNNLAIV 250
            +IV   +  +    +L     ++ A PDL  I  A +  A+       ++ K   +A +
Sbjct: 185 LQIVGPFYSQSQMATALNQTTDVLAANPDLKGIFGANEPTAVGMGRALQQSGKSGKVAAI 244

Query: 251 GFSTPNVMRPYVQRGTVKEFGLWDVVQQGKISVYVANALLKNMPM 295
           GF     ++ +V+ GT++   +    Q G   +    ++++  P+
Sbjct: 245 GFDGNQDLQGFVRDGTIRAIAVQSSYQMGYKGIETVVSVIEKKPV 289