Pairwise Alignments

Query, 347 a.a., Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 320 a.a., LacI family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score = 64.7 bits (156), Expect = 3e-15
 Identities = 62/277 (22%), Positives = 123/277 (44%), Gaps = 19/277 (6%)

Query: 8   MARHSIKMIALLTAFGLASAAMTVQAA---------ERIAFIPKLVGVGFFTSGGNGAQE 58
           M++   + I        A+AA+ + +A          ++A + K +   FF +   GA++
Sbjct: 1   MSQRIRRRILTAAVLATATAALPLSSAYAQSAPAHKPKVALVMKSLANEFFLTMETGAKD 60

Query: 59  AGK--ALGIDVTYDG-PTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQR 115
             K      D+  +G   E   + Q+++V   +    DAI+++      L P +K+A+  
Sbjct: 61  YQKHNPSQFDLITNGIKDETDTANQIRIVEQMIVSKVDAIVLAPADSKALVPVVKKAVDA 120

Query: 116 GVKILTWDSDTKPE-CRSYYIN---QGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSPTV 171
           G+ ++  D+   PE  +S  +N    G   + G+  V     +  K   +V       T 
Sbjct: 121 GIIVVNIDNRLDPEVLKSKDLNVPFVGPDNRKGAQKVGDYLAKKLKAGDEVGIIEGVSTT 180

Query: 172 TDQNQWVKEAKAKISQEHPGWEIVTTQFGYNDATKSLQTAEGIIKAYPDLDAIIAPDAN- 230
           T+  Q  + A  K + +  G ++V+ Q G  +  K    A  ++  YP+L A++A + N 
Sbjct: 181 TNAQQ--RTAGFKDAMQKVGAKVVSVQSGEWEIDKGNAVASAMLNEYPNLKALLAGNDNM 238

Query: 231 ALPAAAQAAENLKRNNLAIVGFSTPNVMRPYVQRGTV 267
           A+ A +      K+  + +VG+   N ++P ++ G V
Sbjct: 239 AIGAVSAVRAAGKQGKVLVVGYDNINAIKPMLKDGRV 275