Pairwise Alignments

Query, 211 a.a., Formate dehydrogenase O gamma subunit (EC 1.2.1.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 327 a.a., formate dehydrogenase, C subunit, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 72.0 bits (175), Expect = 1e-17
 Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 13/197 (6%)

Query: 18  HWIVAFCFVLAAVSGLGFLFPSF---NWLMHIL--GTPQLARILHPFVGVVMFASFIIMF 72
           HW+ A   +L  ++GL  L   F    WL      G    A+ +H  + +     + +M 
Sbjct: 124 HWLGAIPCLLLILTGLVLLAGRFFFQPWLGEGFWAGLVYGAKQVHDVMAIPFMIGWALMI 183

Query: 73  FRYWHHNLINRDDIFWAKNIRKIV----VNEEVGDTGRYNFGQKCVFWAAIIFLVLLLVS 128
             +  + L    D+ W   +   +       +  D G  N G+K  FWA  +F +++  S
Sbjct: 184 TLWAKNQLPKMYDVKWFMVVGGYINFGPFKGKHPDAGFANAGEKMWFWAFALFGLIISAS 243

Query: 129 GVIIWRP-YFAPAFSIPVIRFALMLHSFAAVALIVVIMVHIY-AALWVKGTITAMVEGWV 186
           G+++  P  F P+ ++ +I  AL+LHS +A+ +    +VHI+ A +  +G +  MV G+ 
Sbjct: 244 GMLLLFPNLFEPSRTLSLI--ALVLHSVSAIVICAFSIVHIFMATVMSEGGMECMVSGYC 301

Query: 187 TRSWAKKHHPRWYREVR 203
             +WA +HH  W+ E++
Sbjct: 302 DENWASQHHNLWFDEIK 318



 Score = 25.0 bits (53), Expect = 0.002
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 12  APERINHWIVAFCFVLAAVSGLGFLFPSFNWLMHILGTPQLARILHPFVGVVMFASFIIM 71
           A E++  W  A   ++ + SG+  LFP+       L    +A +LH    +V+ A  I+ 
Sbjct: 224 AGEKMWFWAFALFGLIISASGMLLLFPNLFEPSRTLSL--IALVLHSVSAIVICAFSIVH 281

Query: 72  FF 73
            F
Sbjct: 282 IF 283