Pairwise Alignments

Query, 349 a.a., Nitrogen regulation protein NtrB (EC 2.7.13.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 357 a.a., signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  157 bits (397), Expect = 4e-43
 Identities = 114/346 (32%), Positives = 176/346 (50%), Gaps = 20/346 (5%)

Query: 15  SLINSVLVVDDALAIHYANPAAQQLLAQSSRKLFGTPLPELLSY---FSLNIDLMRESLA 71
           SL    L++     I   NPAA+  +  S R L   P+ + L          D +R++L+
Sbjct: 11  SLPIPALILSGENTILELNPAAENFMNGSQRSLLDAPVWDKLMVDAPLEEAFDRVRKNLS 70

Query: 72  AGQGFTDNEVTLVIDSRSHIL-SLTAQRLPD--DFILLEMAPMDNQRRLSQEQLQHAQQI 128
                  N+V +    R  +L ++    L D  + +LL + P +   RL +     +   
Sbjct: 71  P---LFINDVDVGTGERPPVLCNIQVSPLVDNPELVLLLLEPREIAGRLGRSMQSQSAAK 127

Query: 129 AARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPALTEYTKVIIEQADRLRNLVDRL--L 186
           +A  +   LAHEIKNPL G+ GAAQLL   L +    E T +I+ ++ R+  L++++   
Sbjct: 128 SAIGMAEMLAHEIKNPLAGITGAAQLLGMNLSNED-RELTDLIVAESHRIVKLLEQVEQF 186

Query: 187 GPQHPGMHITESIHKVAERVVALVSMELPDNVRLIRDYDPSLPELPHDPEQIEQVLLNIV 246
           G   P      +IH V ER      +    +V +  DYDPSLP    D +Q+ QV LN++
Sbjct: 187 GNLRPPDLRPVNIHDVLERARRSAVVGFGAHVTIREDYDPSLPNTYADGDQLLQVFLNLL 246

Query: 247 RNALQALGPEGGEITLRTRTAFQLTLH-----GERYRLAARIDVEDNGPGIPPHLQDTLF 301
           +NA +A  P G   T+R RT ++L+L      G    +  +I++ D+GPG+PP ++  +F
Sbjct: 247 KNAAEACKPGG---TIRIRTFYELSLRLRRKDGSGGTVPLQIEIMDDGPGLPPEIESDVF 303

Query: 302 YPMVSGREGGTGLGLSIARNLIDQHAGKIEFTSWPGHTEFSVYLPI 347
            P VSGRE GTGLGL++   +I  H G I   S PG T F + LP+
Sbjct: 304 EPFVSGRENGTGLGLALVSKIISDHDGWIAVDSVPGRTVFRISLPV 349