Pairwise Alignments

Query, 349 a.a., Nitrogen regulation protein NtrB (EC 2.7.13.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 348 a.a., signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) from Shewanella sp. ANA-3

 Score =  348 bits (893), Expect = e-100
 Identities = 183/343 (53%), Positives = 240/343 (69%), Gaps = 3/343 (0%)

Query: 8   DAGQILNSLINSVLVVDDALAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFSLNIDLMR 67
           D   +LN L+ +VLV+D  L   YAN AA+QLL   S +L    LPE      +   ++ 
Sbjct: 2   DKETLLNHLVTAVLVIDKDLKPCYANAAAEQLLGVGSHRLVEQALPEHYQALGVEAQILS 61

Query: 68  ESLAAGQGFTDNEVTLV-IDSRSHILSLTAQRLPDD--FILLEMAPMDNQRRLSQEQLQH 124
           +++ AGQG T N  TLV +D++ H + LT   L D+    LLE+  +D QRR+ Q+  Q 
Sbjct: 62  DAVKAGQGLTVNTATLVTLDAQHHTVDLTLIPLEDEAQLSLLELRQVDQQRRIHQQLSQD 121

Query: 125 AQQIAARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPALTEYTKVIIEQADRLRNLVDR 184
           AQQ AA+ LVR LAHEIKNPLGGLRGAAQLLS+ L DPA  E+T +IIEQADRLR+LVDR
Sbjct: 122 AQQQAAQFLVRNLAHEIKNPLGGLRGAAQLLSRELDDPAQKEFTNLIIEQADRLRSLVDR 181

Query: 185 LLGPQHPGMHITESIHKVAERVVALVSMELPDNVRLIRDYDPSLPELPHDPEQIEQVLLN 244
           LLGPQ P  H   +IH+V ++V  LV M LP N++L RDYDPS+P++  DP+Q++Q +LN
Sbjct: 182 LLGPQRPTQHSLHNIHQVVQKVYKLVEMALPANIQLKRDYDPSIPDIEMDPDQMQQAVLN 241

Query: 245 IVRNALQALGPEGGEITLRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTLFYPM 304
           I++NA+QAL   GGEI +RTRT  Q+T+  +R++L   + + DNGPGIPP L DTLFYPM
Sbjct: 242 ILQNAVQALEHTGGEILIRTRTQHQVTIGSQRHKLVLTLSIIDNGPGIPPELMDTLFYPM 301

Query: 305 VSGREGGTGLGLSIARNLIDQHAGKIEFTSWPGHTEFSVYLPI 347
           V+ RE G+GLGLSIA N+   H+G+I+  S PGHTEF + LPI
Sbjct: 302 VTSREQGSGLGLSIAHNIARLHSGRIDCVSSPGHTEFIISLPI 344