Pairwise Alignments

Query, 469 a.a., Nitrogen regulation protein NR(I) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 459 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  348 bits (892), Expect = e-100
 Identities = 200/462 (43%), Positives = 279/462 (60%), Gaps = 21/462 (4%)

Query: 8   VVDDDSSIRWVLERALAGAGLTCTTFENGNEVLAALASKTPDVLLSDIRMPGMDGLALLK 67
           V+DD+ +   VLE  L  AG T T   +    LA L     DV+++D++MP + G  +L+
Sbjct: 9   VLDDEKNYLLVLEALLTDAGYTVTALNDPETGLAFLEESEVDVIVTDMKMPKITGREVLE 68

Query: 68  QIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAIS----HYQ 123
           Q+K+  P +PV+IMTA   +++AV   + GAFDY+ KPF  DE +  V  A      H Q
Sbjct: 69  QVKKNWPHIPVLIMTAFGSIESAVEVMKYGAFDYITKPFSNDELLLSVHNAAELSRMHRQ 128

Query: 124 EQQQPRNIEVNGPTTDMIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHR 183
            +    N+E       +IG++ A+++   ++ R + S  +VLI+GESGTGKELVA A+H 
Sbjct: 129 YRVLRENLEERYGMHQIIGKSRAIRETLGMVDRAAPSRSTVLISGESGTGKELVARAIHF 188

Query: 184 HSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGD 243
            SPR K PF+++N  A+   ++ESELFGHEKG+FTGA  +R+GRFEQA GGTLFLDEIG+
Sbjct: 189 SSPRNKGPFVSVNCMALNPGVLESELFGHEKGSFTGAVAMRRGRFEQAGGGTLFLDEIGE 248

Query: 244 MPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLERRVQEGKFREDLFHRLNV 303
           +  ++Q +LLRVL + +F RVGG   V+VD+RI+AAT++NL+  V++G FREDLF+RLNV
Sbjct: 249 LTPELQVKLLRVLQERRFERVGGTEEVEVDIRIVAATNKNLQEEVEKGNFREDLFYRLNV 308

Query: 304 IRIHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETETALTRLAWPGNVRQLENT 363
           + I LPPLRERREDI  L  HF+   ARE GV  K   PE    +T   WPGN+RQL+N 
Sbjct: 309 VHIALPPLRERREDIHLLVAHFVDKLARENGVTPKTFTPEALDYMTGYEWPGNIRQLQNV 368

Query: 364 CRWLTVMAAGQEVLIQDLPGELFEASTPDSPSHLPPDSWATLLAQWADRALRSGHQNLLS 423
                V+ +G  + + DLP EL      D  S L   S   LL    D          L+
Sbjct: 369 VERCLVLVSGDTIRVDDLPPEL-----RDEESQL--KSAVDLLPVQLD----------LA 411

Query: 424 EAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKE 465
           +    +E  L+  AL      + +AA LL   ++ L  KLK+
Sbjct: 412 DTLERIEAALIRRALVRADFVQVKAAELLAISKSLLQYKLKK 453