Pairwise Alignments

Query, 344 a.a., Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 354 a.a., lipoprotein-34 NlpB (RefSeq) from Shewanella amazonensis SB2B

 Score =  117 bits (293), Expect = 4e-31
 Identities = 97/337 (28%), Positives = 155/337 (45%), Gaps = 30/337 (8%)

Query: 22  LAACSSDSRYKRQVSGDESYLDAAPLAELHAPAGMILPITTGDYVIPVTKGSGA----VG 77
           +AA  +    +RQ +G++ Y++A   A L  P G+  P  + +Y IP T G+ A    VG
Sbjct: 1   MAAGCTTPMERRQANGNDEYVNAQTTAPLKVPEGLKSPNYSREYDIP-TLGAKANRELVG 59

Query: 78  KALDIRPPAQPLALVSGARTQFSGDTATLLVENGRSSTLWPQVV-----SVIQAKNYPIE 132
           K LDIRPP Q L +  G R +   D   ++VE+  +S    Q +       +Q++N  I 
Sbjct: 60  KNLDIRPPLQVLPMAEGTRVEEGSDNVKVIVESFDNSLDLKQEIFGLLKDHLQSRNIEIV 119

Query: 133 KRDDASQTLTTDWVNWNRLDEDE----------QYRGRYQISVKPQGYQQAVTVKLVNLE 182
           K D AS TL T W+    + E            + R +YQ+ V+P G   AV + LV+ +
Sbjct: 120 KEDFASGTLETGWIETQEVLESSLWGSDKVFNLKQRYQYQVEVRPHGRTGAVIINLVDHQ 179

Query: 183 QAG-----KPVADAASLQRYSTEMMNVISAGLDKTATDAANAAQNRSAATMDVQSA-ADD 236
           ++      K    A   +RY+ +M+N   A +      A  A + R +  + V+     +
Sbjct: 180 ESYDGDDLKTALSADDKRRYAIDMLNNSIAYMAVKREQAIKAKRVRESLGIGVELVDGAE 239

Query: 237 TGLPMLVVRGPFNLVWQRLPAALEKVGMKVTDSTRSQGSMAVTYKPLSDSDWRDL-GASD 295
            G    + +G FN VW RL   L ++G ++ D   S+G   + Y   +   W  L G + 
Sbjct: 240 EGDAFYLAQGDFNQVWGRLRLVLPEMGFEIADMDSSKGVYFLNYSD-NSGFWSSLWGDAK 298

Query: 296 PGLASGDYKLQV--GDLDNRSSLQFIDPKGHTLTQSQ 330
             L+ G YKL V  G+    S L  +D +   L   +
Sbjct: 299 LELSKGTYKLNVKDGETKGTSELHILDKEDSPLADEK 335