Pairwise Alignments

Query, 226 a.a., hypothetical protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 251 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  172 bits (436), Expect = 5e-48
 Identities = 96/221 (43%), Positives = 130/221 (58%), Gaps = 5/221 (2%)

Query: 4   NAVLQLRAERLARATRPFLARGNRVRRCQRCLLPLKSCLCDTLTPSQAKSRFCLVMFDTE 63
           +AV +L   R + +T+PF ARG ++ RC  CLL  + C C        ++ F L+M++ E
Sbjct: 6   HAVHRLYEYRKSISTKPFGARGKKLIRCPLCLLGEQFCTCSLRKQLTTQASFLLIMYNDE 65

Query: 64  PMKPSNTGRLIADILPDTAAFQWSRTEPPQALLELVQHPDYQPIVVFPASYAGEAREVIS 123
            +KP+N+GRLIAD++PDT AF WSRT+P   LL L+    YQP +VFPA YA + + V+S
Sbjct: 66  VLKPTNSGRLIADLIPDTHAFLWSRTDPAPELLALLSSDHYQPFLVFPAQYADQGQTVLS 125

Query: 124 TPP-----AGKPPLFIMLDGTWPEARKMFRKCPYLDHLPVISVDLSRLSAYRLREIHAEG 178
             P      GK PL IMLDG+W EA KMFRK PYL  LP++S D   L+ Y LR+   + 
Sbjct: 126 QVPMATLAKGKRPLLIMLDGSWREAIKMFRKSPYLQGLPILSFDPDTLATYALRKGSHDF 185

Query: 179 QYCTAEVAIALLDLAGDTEAATSLGEHFTRFKTRYLAGKTQ 219
           Q  TAEVA   L   G+     +L   F  F    L G+ +
Sbjct: 186 QLGTAEVASLALAAMGEEANGKALTAWFDLFVESSLLGRNR 226