Pairwise Alignments

Query, 209 a.a., Ribonuclease Z (EC 3.1.26.11) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 393 a.a., Ribonuclease Z from Synechococcus elongatus PCC 7942

 Score =  156 bits (394), Expect = 6e-43
 Identities = 82/212 (38%), Positives = 125/212 (58%), Gaps = 3/212 (1%)

Query: 1   VREFIATTLRLSGSWTDFPLQIEEISAGDILDDGLRKVTAFRLEHPLECYGYRVVEHDKP 60
           +R+++    + S +  ++PLQI  +  G I +D    V+   L H +  +GYR+ E D+P
Sbjct: 95  LRDYLQACAQHSRTHINYPLQIATVQPGVIYEDAEIVVSCAPLHHRVPAFGYRIQERDRP 154

Query: 61  GALNARALKAAGVTPGPLFQALKAGKTVTLADGRQINGADYLAPAVAGKSVAIFGDTAPC 120
           G  +    ++ G+ PGP+++ LK G+TVTL DGRQI+G     P   G+S+    DT  C
Sbjct: 155 GRFDVEKARSLGIPPGPIYKQLKDGETVTLEDGRQIDGRQLCGPTERGRSMVYCTDTIFC 214

Query: 121 EAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREAAVGRLIMTHISSRY- 179
           E+A+ALAQ  DV++HE+T      E A  R H++    A +A++A V +LI+TH S RY 
Sbjct: 215 ESAIALAQDADVLIHESTFSDRDREMAEQRLHATATMAAEVAKQAGVRQLILTHFSPRYA 274

Query: 180 --DDKGCQRLLAECRAIFPATELAYDFSVFPV 209
             +++    LLAE +AIFP T LA DF  + V
Sbjct: 275 PGNEQTLDDLLAEAQAIFPQTMLAKDFLSYDV 306