Pairwise Alignments

Query, 548 a.a., Inner membrane protein translocase component YidC, long form from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 586 a.a., membrane protein insertase, YidC/Oxa1 family, N-terminal domain from Sphingomonas koreensis DSMZ 15582

 Score =  238 bits (606), Expect = 6e-67
 Identities = 180/576 (31%), Positives = 274/576 (47%), Gaps = 67/576 (11%)

Query: 2   DSQRNLLVIALLFVSFMI-WQAWEQ----DKNPQPQTQQTTQTTTTAAGSAADQGV--PA 54
           D Q+N L+ A+L    +  W    Q      NP P T+     T   A   AD     PA
Sbjct: 3   DDQKNFLLFAVLAALLLFGWPMATQWLFPTANP-PVTEVKGGKTEVVANPGADPAADSPA 61

Query: 55  S--------GQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSN-EPFQLLETT-P 104
           +         +   + ++T  +  +IN +G  ++  +L  + + +  + +P +LL  +  
Sbjct: 62  AIRDRKLVLAETPRVQIETPTVRGSINLKGARIDDLVLVKHKETIAKDSDPIRLLSPSGT 121

Query: 105 QFIYQAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNELQVPMTYTDAAGNTFTKT 164
           Q  Y A  G +G  G   PA           +A   A G      P T      +  T+ 
Sbjct: 122 QDAYFAGFGWSGT-GLTAPA----------ADAVWTASGDK--LTPTTPVKLTSSNGTQR 168

Query: 165 FVFKRG---DYAVNVNYSVQNAGEKPLEVSTFGQLKQSVNLPPHRDTGSSNFALHTFRGA 221
           F+ +      Y   V   V N G+KP+ V+ +G L +     P +D     + +H    A
Sbjct: 169 FIIELSVDEGYMFTVRQRVANLGDKPISVAGYGYLYR---YGPGKD--HDTWTIHAGPVA 223

Query: 222 AYSTPDEKYEKYKFDTIADNENLNVSSKGGWVAMLQQYFATAWIPRNDGTNNFYTANLGN 281
           +Y+   +    Y  DT+ D    +  S GGWV     Y+ TA +P             G 
Sbjct: 224 SYNGVVDYGVNY--DTVKDEGPKSFDSTGGWVGYTDIYWLTALVPDQGMKTALKFRPAGG 281

Query: 282 GIVAIGYK-AQPVLVQPGQTGAMTSTLWVGPE----IQDKMAAVAPH-LDLTVDYGWLWF 335
                 ++ A    V PGQ    TS  + G +    + D       H     +D+GW   
Sbjct: 282 TATQAQFEPATARQVGPGQMVTQTSRFFAGAKDINLLDDYEEKGGIHQFGKAIDWGWFEI 341

Query: 336 ISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRE 395
             +P+F  L W+   +GN+G +II +T  VR +++P+ + Q+ SMA+MR +QPK++A++E
Sbjct: 342 FEKPIFHYLNWLFRMIGNFGVAIIALTLTVRLLLFPIAQKQFASMAQMRAVQPKMKAIQE 401

Query: 396 RLGDDKQRQSQEMMALYKAEKVNPLGGCFPLIIQMPIFLALYYMLMGSIELRHAPFALWI 455
           R  DDKQRQ QE+M LYK EKVNPL GC P ++Q+PI  ALY +LM SIE+RH PF LWI
Sbjct: 402 RYKDDKQRQQQEIMKLYKDEKVNPLAGCLPTLLQIPILYALYKVLMLSIEMRHQPFILWI 461

Query: 456 HDLSAQDPYYI-------------------LPILMGVTMFFIQKMSPTTVTDPMQQKIMT 496
            DLSA DP +I                   LPIL+G++M+   K++P  + D +Q+++  
Sbjct: 462 KDLSAPDPLHILNLFGLLDFNPPAFLAIGVLPILLGLSMWAQFKLNPAPM-DDVQKQVFA 520

Query: 497 FMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIY 532
            MP +       F +GL LY+I SNL+TI QQ+ +Y
Sbjct: 521 IMPWVLMFVMAPFAAGLQLYWITSNLLTIAQQKFLY 556