Pairwise Alignments

Query, 454 a.a., GTPase and tRNA-U34 5-formylation enzyme TrmE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 439 a.a., tRNA modification GTPase TrmE from Sinorhizobium meliloti 1021

 Score =  277 bits (709), Expect = 4e-79
 Identities = 182/466 (39%), Positives = 250/466 (53%), Gaps = 39/466 (8%)

Query: 1   MSHNDTIVAQATPPGRGGVGILRISGLKARDVAQEVLGKLPKPRYADYLPFKDVDGSALD 60
           M   DTI A ++     GV I+R+SG +  D    + G LP PR A     +  +G  LD
Sbjct: 1   MLSTDTIYALSSGSLPAGVAIIRVSGPETADALVRLCGTLPPPRIATLRTIRTRNGETLD 60

Query: 61  QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTLPGVRIARPGEFSERAFLNDK 120
            G+ L+FP P SFTGED  ELQ HGG  ++  +L  +    G+R A  GEF+ RAF N K
Sbjct: 61  SGLVLYFPTPASFTGEDCCELQVHGGRAVVSAILDELAATGGLRHAEAGEFARRAFQNGK 120

Query: 121 LDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEE 180
           LDL + E +ADLI A +E   R A+    G  SA        LTH R  +EA +DF DE+
Sbjct: 121 LDLVEVEGLADLIAAETEMQRRLAIEQSGGGQSALYAGWARRLTHSRAMIEAELDFADED 180

Query: 181 --------IDFLSDGKIEAQLNGVIADLDAVRTEARQGSLLREGMKVVIAGRPNAGKSSL 232
                   + +   G++  +++G IA        A    ++R+G+K+VIAG PNAGKSSL
Sbjct: 181 DVPGSVSAVIWEDVGRLRQEIDGHIA-------RAGLAEIIRDGLKIVIAGEPNAGKSSL 233

Query: 233 LNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDEVERIGIERAWQE 292
           LNALA R+ AIVT++AGTTRDVL   + + G  + + DTAGLR+  + VER GI RA Q 
Sbjct: 234 LNALARRDIAIVTEVAGTTRDVLSVDLSLAGFSVKLFDTAGLRETDELVEREGIRRARQV 293

Query: 293 IEQADRVLFMVDGTTTDAVDPADIWPDFIARLPKNLPITVVRNKADITGETLGISEVNGH 352
           I  AD VL + +      +D           LP+N+P+  V  K D    +   S+ +  
Sbjct: 294 IADADLVLLLSEKPGHFRIDEV---------LPENVPVIRVATKVDRPSPSWAPSDAD-- 342

Query: 353 SLVRLSARTGEG----IDVLRNHLKQSMGFDTNMEGGFLARRRHLQALAEAAEHLEQGKA 408
             + LS RTGEG    +  L++HL    G          +R+RH+  L +A+  LE+   
Sbjct: 343 --IFLSTRTGEGMADLLTALQSHLPDLAG---RTALAMPSRKRHVDCLRQASAALERS-- 395

Query: 409 QLLGAWAGELLAEELRLAQQSLSEITGEFTSDDLLGRIFSSFCIGK 454
             L +   EL AE+LR A  +L  ITG    ++LL  IFS FCIGK
Sbjct: 396 --LISSDLELRAEQLRQAGDALGRITGRVDVENLLDVIFSEFCIGK 439