Pairwise Alignments

Query, 454 a.a., GTPase and tRNA-U34 5-formylation enzyme TrmE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 457 a.a., tRNA modification GTPase TrmE (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  660 bits (1703), Expect = 0.0
 Identities = 332/450 (73%), Positives = 384/450 (85%)

Query: 5   DTIVAQATPPGRGGVGILRISGLKARDVAQEVLGKLPKPRYADYLPFKDVDGSALDQGIA 64
           DTIVAQAT PGRGGVGI+RISG KA +VA  VLG LPKPRYADY  FK   G  +DQGIA
Sbjct: 8   DTIVAQATAPGRGGVGIIRISGDKATNVAMAVLGHLPKPRYADYCYFKSASGQVIDQGIA 67

Query: 65  LWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTLPGVRIARPGEFSERAFLNDKLDLA 124
           L+F GPNSFTGEDVLELQGHGG ++LD+L+KR+L + G+RIA+PGEFSE+AF+NDKLDL 
Sbjct: 68  LFFKGPNSFTGEDVLELQGHGGQIVLDMLIKRVLEVEGIRIAKPGEFSEQAFMNDKLDLT 127

Query: 125 QAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAIDFPDEEIDFL 184
           QAEAIADLIDA+SEQAA+SAL SLQG FS  V+ LV+ +THLR+YVEAAIDFPDEE+DFL
Sbjct: 128 QAEAIADLIDATSEQAAKSALQSLQGEFSKEVHELVDQVTHLRLYVEAAIDFPDEEVDFL 187

Query: 185 SDGKIEAQLNGVIADLDAVRTEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGREAAIV 244
           SDGKI   L  +I  L AV+  A+QGS++REGMKVVIAGRPNAGKSSLLNALAG+E+AIV
Sbjct: 188 SDGKIANALYKIIDKLIAVQASAKQGSIIREGMKVVIAGRPNAGKSSLLNALAGKESAIV 247

Query: 245 TDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDEVERIGIERAWQEIEQADRVLFMVD 304
           T+IAGTTRDVLREHIH+DGMPLHIIDTAGLRD +D VE+IGIERAW EI  ADRVLFMVD
Sbjct: 248 TEIAGTTRDVLREHIHLDGMPLHIIDTAGLRDTTDTVEQIGIERAWNEINSADRVLFMVD 307

Query: 305 GTTTDAVDPADIWPDFIARLPKNLPITVVRNKADITGETLGISEVNGHSLVRLSARTGEG 364
           GTTT AVDP DIWPDFI RLP NL +TV+RNKAD+TGE L ++E  G+S+ R+SA+TG G
Sbjct: 308 GTTTTAVDPHDIWPDFINRLPTNLGVTVIRNKADLTGENLEMTEEKGYSVYRISAKTGLG 367

Query: 365 IDVLRNHLKQSMGFDTNMEGGFLARRRHLQALAEAAEHLEQGKAQLLGAWAGELLAEELR 424
           +D L+ HLK  MG+ +N+EGGF+ARRRHL+AL  AA HL+ GK QL    AGELLAEELR
Sbjct: 368 VDELKQHLKSLMGYQSNLEGGFIARRRHLEALEIAASHLQLGKEQLEVYLAGELLAEELR 427

Query: 425 LAQQSLSEITGEFTSDDLLGRIFSSFCIGK 454
           +AQ +LSEITG FTSDDLLG+IFSSFCIGK
Sbjct: 428 MAQLALSEITGRFTSDDLLGKIFSSFCIGK 457