Pairwise Alignments

Query, 236 a.a., Integrase from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 416 a.a., integrase arm-type DNA-binding domain-containing protein from Rahnella sp. WP5

 Score =  120 bits (302), Expect = 3e-32
 Identities = 77/231 (33%), Positives = 122/231 (52%), Gaps = 16/231 (6%)

Query: 1   MLAYAISRGIIFNNPAAAIEARYITQATSRDVALTAEEIGILLRGIYTSNMNRRHKLALH 60
           ++ +A+  G+I  NPA  +             AL  E I  LL  +      +  KLA+ 
Sbjct: 172 IMRFAVQSGLIDYNPAQEMAGAIAVAKRQHRPALEFEHIPELLDRVENFKGRKLTKLAVK 231

Query: 61  LLIICMVRKSELIEATWSEVNFNALEWRIPGER------------MKMDNPHIVPLSKQA 108
           L ++  +R SEL  A WSE++F+   W IP ER             KM  PH+VPLS Q+
Sbjct: 232 LSLLVFIRSSELRFARWSEIDFDNAMWTIPAEREPLKGVKHSHRGSKMRTPHLVPLSNQS 291

Query: 109 LAMFEELKFLAGDSPYVFPSRHGYRRPISKTTLNCAVRTLDLNVR-DFVIHDFRRTASTL 167
           L + EE+K ++G    +F   H   +P+S+ T+N A+R +  + + D   H FR  A + 
Sbjct: 292 LIVLEEIKTISGGYDLIFIGDHNPGKPMSENTVNTALRGMGYDTKTDVCGHGFRAMACSA 351

Query: 168 LHEQG-YNSDWIEKYLAH-KIGGVHGVY-NRAEYLNQRREMLQSWADFVDA 215
           L E G ++ D +E+ ++H +   V   Y ++AE+L +RR M+Q WAD++DA
Sbjct: 352 LVECGLWSKDAVERQMSHQERNSVRAAYIHKAEHLGERRLMIQWWADYLDA 402