Pairwise Alignments

Query, 236 a.a., Integrase from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 402 a.a., site-specific integrase from Lysobacter sp. OAE881

 Score =  150 bits (378), Expect = 5e-41
 Identities = 91/226 (40%), Positives = 127/226 (56%), Gaps = 6/226 (2%)

Query: 4   YAISRGIIFNNPAAAIEARYITQAT---SRDVALTAEEIGILLRGIYTSNMNRRHKLALH 60
           YA++ G   ++P    + R + QA    S    +  + +G LLR ++          AL 
Sbjct: 170 YALATGRAESDPTR--DLRGVLQAVKVRSHAAVIDPKPVGDLLRALHAYEGQPTTVAALK 227

Query: 61  LLIICMVRKSELIEATWSEVNFNALEWRIPGERMKMDNPHIVPLSKQALAMFEELKFLAG 120
           L  +  VR   L    WSE++F+A EWRIP  +MKM   H+VPL+KQAL +  ELK L G
Sbjct: 228 LAPLLFVRPGNLRAMEWSELDFDAAEWRIPAGKMKMREAHVVPLAKQALVLLRELKRLTG 287

Query: 121 DSPYVFPSRHGYRRPISKTTLNCAVRTLDLNVRDFVIHDFRRTASTLLHEQGYNSDWIEK 180
              Y FPS     RP+S+ T+N A+R L  +      H FR  AS+LL+E G+  D IE+
Sbjct: 288 RGRYCFPSLLTDDRPMSENTVNVALRRLGFDKDTMTGHGFRAMASSLLNELGWAPDVIER 347

Query: 181 YLAH-KIGGVHGVYNRAEYLNQRREMLQSWADFVDAQIETGRKVII 225
            LAH +   V  VYNRA+Y+ +RR+M+QSWAD++D   E G  V I
Sbjct: 348 QLAHAERNKVRAVYNRAQYMAERRKMMQSWADYLDQLREGGTVVAI 393