Pairwise Alignments

Query, 236 a.a., Integrase from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 413 a.a., Integrase from Sphingomonas koreensis DSMZ 15582

 Score =  133 bits (335), Expect = 5e-36
 Identities = 80/214 (37%), Positives = 113/214 (52%), Gaps = 3/214 (1%)

Query: 4   YAISRGIIFNNPAAAIEARYITQATSRDVA-LTAEEIGILLRGIYTSNMNRRHKLALHLL 62
           Y ++ G   ++P + +    IT  T+   A L     G LLR I     +R  +LA  + 
Sbjct: 176 YGVATGRAESDPTSLLRGALITPKTTHHAAILEPAAFGELLRAIEAYPGHRITRLACQIS 235

Query: 63  IICMVRKSELIEATWSEVNFNALEWRIPGERMKMDNPHIVPLSKQALAMFEELKFLAGDS 122
              M R  E+ +A W E++F    WRIP  RMKM  PH +PLS+Q  A   EL  L G  
Sbjct: 236 PHVMARPGEIRQALWPEIDFEHSVWRIPATRMKMRRPHSIPLSRQMKAYLAELHELTGPD 295

Query: 123 PYVFPSRHGYRRPISKTTLNCAVRTLDLNVRDFVIHDFRRTASTLLHEQG-YNSDWIEKY 181
            ++ P+ H  RRP+S+ T+N A R +     +   H  R TASTLL+E G ++ D IE+ 
Sbjct: 296 GFILPAFHTSRRPLSENTVNQAFRRMGYAAGEVTAHGLRTTASTLLNESGKWSPDAIERS 355

Query: 182 LAH-KIGGVHGVYNRAEYLNQRREMLQSWADFVD 214
           LAH     V G YNR  Y ++R  M Q W+D++D
Sbjct: 356 LAHADKDAVRGTYNRGAYWDERVAMHQWWSDYLD 389