Pairwise Alignments

Query, 236 a.a., Integrase from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 399 a.a., tyrosine-type recombinase/integrase from Castellaniella sp019104865 MT123

 Score =  208 bits (530), Expect = 1e-58
 Identities = 110/226 (48%), Positives = 146/226 (64%), Gaps = 2/226 (0%)

Query: 1   MLAYAISRGIIFNNPAAAIEARYITQATSRDVALTAEEIGILLRGIYTSNMNRRHKLALH 60
           M  YA++ G+I  NP  A+  R++ +A +RD ALT +EI   LR + TSN+ R+ K+A  
Sbjct: 171 MFDYALTCGLIQANPVMALPMRHVYRAAARDRALTPDEIRQFLRAMQTSNIRRQFKIAFQ 230

Query: 61  LLIICMVRKSELIEATWSEVNFNALEWRIPGERMKMDNPHIVPLSKQALAMFEELKFLAG 120
           L+++ +VRKSEL+ A W +V+ +  EW IP E  K   PHIV LS QA  +F+ELK LA 
Sbjct: 231 LILMTLVRKSELMLAQWKDVHLDEGEWHIPVENSKTGKPHIVYLSTQAQTLFKELKPLAS 290

Query: 121 DSPYVFPSRHGYRRPISKTTLNCAVRT--LDLNVRDFVIHDFRRTASTLLHEQGYNSDWI 178
            S +V P R    +P +   LN A++       +  F IHD RRTASTLLHEQG+ SD +
Sbjct: 291 SSVWVLPGRGALAKPFASNALNQALKVSLQGQEIPAFTIHDLRRTASTLLHEQGWPSDVV 350

Query: 179 EKYLAHKIGGVHGVYNRAEYLNQRREMLQSWADFVDAQIETGRKVI 224
           EK L H IGGV GVYNRAEY  QRREMLQ+W+D++D    +G  VI
Sbjct: 351 EKALNHTIGGVRGVYNRAEYAEQRREMLQAWSDYIDRLAPSGNLVI 396