Pairwise Alignments

Query, 319 a.a., Putative LysR-family transcriptional regulator YidZ from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 319 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  157 bits (396), Expect = 4e-43
 Identities = 104/315 (33%), Positives = 162/315 (51%), Gaps = 17/315 (5%)

Query: 4   SLTNLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLAKLRAWFDDPLFVNTPLGLA 63
           +L  +DLNLL+ L++L++E+SVT+AA R++++ SA+SKSL +LR   DDPLF  T  GL 
Sbjct: 5   NLARIDLNLLVILKVLLEEQSVTRAASRLHISQSALSKSLNRLRETLDDPLFQRTAHGLK 64

Query: 64  PTPLMVSMEQSLADWMQMGNQLLDKPHHQTP--RGLKFELAAESPLMMIMFNSLSQQIYQ 121
           PT   +++   L + +Q   QL   P   TP     +F  A        +       +  
Sbjct: 65  PTAHALNIGLKLPNILQDLYQLTQPPTF-TPASSNRQFSFAMVESAYETLIPYFIGPLLS 123

Query: 122 RYPQATIKVRNWDYDSLEAITRGEVDIGFTGRESHPRSRELLSLLPLAIDFEVLFSDLPW 181
             P   +    W   S+  + +G++D G +GR+ HP S      LP  I  + LF+D   
Sbjct: 124 TAPNLKLDSYVWTEKSMHDLQQGQIDFGISGRDLHPLSDSQTDRLPDGISCQTLFTDRQV 183

Query: 182 VWLREDHP----ALREAWDLDTFLRYPHISICWEQSDTWALDDVLQEMGRKRHIALSLPG 237
             +R+DHP     +   WDL+ +L   H+ +  E SD WALD  L ++G +R I+ ++P 
Sbjct: 184 CLVRQDHPLMTALISPQWDLNLYLDMAHVQVRCEGSDWWALDYFLADLGHRRKISTTVPD 243

Query: 238 FEQSLFMAAQPGHTLIATAP-RYCQHYNQLHQLPLVARPLPFDAQQREKLMVPFTLLWHK 296
           F  +  + A     LI T P  +  H  +L+ L L+  PLPF     E + + + LLWH+
Sbjct: 244 FYGAASICAH--SDLIFTLPSSFALHACKLYPLRLL--PLPF-----EFIPMAYVLLWHQ 294

Query: 297 RNSHNPKIVWLRQAI 311
           RN  +    W+R  I
Sbjct: 295 RNDEDQGHKWMRDTI 309