Pairwise Alignments

Query, 321 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 323 a.a., ABC transporter permease from Rahnella sp. WP5

 Score =  250 bits (639), Expect = 3e-71
 Identities = 130/301 (43%), Positives = 198/301 (65%), Gaps = 14/301 (4%)

Query: 22  SLIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLA 81
           +LI L++++   S LSP FFTV NL NILQQ+S+N I+A+GMTL+I++ GIDLSVG   A
Sbjct: 26  TLIGLVIIVITFSFLSPVFFTVPNLLNILQQSSINGIIALGMTLIIISGGIDLSVGPTAA 85

Query: 82  LTGAVAASIVGVEVNALVAVAAALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVT 141
           L+  + A+++   V   +A+ A L +GA  G  +G++VA   +Q FI TL  + L R + 
Sbjct: 86  LSAVLGATLMVSGVPVPLAIMATLGVGALCGVFSGMLVAYAGLQPFIVTLGGLSLFRALA 145

Query: 142 MVYTDGSP-----VNTGFTDNADLFGWFGIGRPLGVPTPVWIMAIVFIAAWYMLHHTRLG 196
           +++T+G+P     V      N+ +FG         VP P+ I+  +    W +++ T LG
Sbjct: 146 LIFTNGNPIFGIPVEFRTVINSTIFG---------VPAPIVIVIAIAAILWTVMNKTPLG 196

Query: 197 RYIYALGGNEAATRLSGISVSKVKIIVYSLCGLTASLAGIIEVARLSSAQPTAGTGYELD 256
            YI A+GGNE A R++G+ V + K+ V+ + G+ ASLA +I + RL +A+PT G  +ELD
Sbjct: 197 EYILAVGGNEEAARVAGVPVKRTKVTVFVISGVLASLASLILIGRLGAAEPTMGNLWELD 256

Query: 257 AIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLV 316
           AIAA  +GG SL GGKG ++GTLIGA+ILG L NGL LL + ++YQ++   ++I++A+L+
Sbjct: 257 AIAAAAIGGASLMGGKGSVIGTLIGAVILGSLRNGLTLLNIQAFYQLLATGLIIIIAMLI 316

Query: 317 D 317
           D
Sbjct: 317 D 317