Pairwise Alignments

Query, 129 a.a., Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 229 a.a., chemotaxis protein CheY/response regulator receiver domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 89.7 bits (221), Expect = 2e-23
 Identities = 43/122 (35%), Positives = 72/122 (59%)

Query: 4   KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFIISDWNMPNM 63
           ++ + L+V+D   MR+I+   L+++GF  V +AE+G  AL  L+      ++ DWNMPN 
Sbjct: 4   RQQQALIVEDMDVMRKILVEQLRKMGFGQVYQAENGRRALELLEEVSIDIVLMDWNMPNG 63

Query: 64  DGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKI 123
            G +LLK IR+      LPV++VTA   +  I  A + G    + KPFT  TL++++ ++
Sbjct: 64  SGTDLLKAIRSQEKWQYLPVMIVTANTHRNMIQEAIKYGVVDIIAKPFTTKTLQDRVLQV 123

Query: 124 FE 125
            +
Sbjct: 124 LQ 125



 Score = 35.0 bits (79), Expect = 7e-07
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%)

Query: 9   LVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQ-AGGFGFIISDWNMPNMDGLE 67
           LVVDD +    ++  LLK+     +  A+DG  ALN  Q A     ++ D  MP+MDG +
Sbjct: 161 LVVDDTADNLAVMVGLLKDT--YKILVAKDGQTALNLCQSANAPDIVLLDIMMPDMDGYQ 218

Query: 68  LLKTIR 73
           +L  +R
Sbjct: 219 VLNALR 224