Pairwise Alignments

Query, 423 a.a., Candidate type III effector Hop protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 442 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 57.4 bits (137), Expect = 9e-13
 Identities = 95/436 (21%), Positives = 173/436 (39%), Gaps = 52/436 (11%)

Query: 8   DDFTGSNDTGVQLAKKGARTEVML-----SASQKPSRRADVLVINTESRAMPADQAASAV 62
           DD TGS D    L+ +G  T + L     S  ++ +R     +  T     P   A +  
Sbjct: 11  DDLTGSTDVMEALSSQGVETALFLKVPEPSLFERFARCRAFGLAGTSRSQTPGWMAENLP 70

Query: 63  YAALSPWCETSPAPLVYKKIDSTFR-----GNIGAEVTAAMRASQRKLAVIAAAIPAAGR 117
            A L  W +   A + + K+ STF      GNIG  +             +    P   R
Sbjct: 71  PAFL--WLKALKAEIAHYKVCSTFDSSPGVGNIGKAIEIGRDVFGAAPVPLVIGAPQIRR 128

Query: 118 TTLEGKCL---------VNGVPLLETEFASDPKTPIVSSRIAEIVALQSEIPVYEVFLQD 168
            T  G            ++  P++       P TP+  + I   ++ Q+ +    V L  
Sbjct: 129 YTAFGNLFAAFRGETYRIDRHPVMSRH----PVTPMNEADIRLHLSRQTSLSAALVDLVQ 184

Query: 169 VRRGGLSALLTAYAAEGEGIIVVDAVEERDLTLIAQAACEQPSMP--LLVGAAGLANALP 226
           +    + A      A+ + ++++D  +E    ++ +      +     + G++G+  AL 
Sbjct: 185 LASPDVDAFADRALADHQ-LVLLDVADEGSQAVVGRQLWRTRTAEGQFVCGSSGIEYALV 243

Query: 227 VE-----------LFMQDRQRLPVLVVAGSMSEATRRQVDNALCRGRAEVVDIDAARMVS 275
            E            F        + VV+GS+S  T RQ+ +A+  G  + + +DA  + +
Sbjct: 244 REWRRLGLIGEAPAFAPPGPVDRIAVVSGSVSPTTERQIRHAIQNG-FDGIALDAVALAA 302

Query: 276 DSAEQEIASVVEQACALLSQHRHTILRTSRR-AEDRQLIDALCEKSAMSRQQLGERLSQR 334
             A   +   V +  A L + R  +L T+   + DR   DA+  +   SR ++GERL   
Sbjct: 303 TDAGSALEDAVARGLASLEKGRSVLLYTALGPSADRG--DAIPVEDG-SRHRIGERL--- 356

Query: 335 LGVVTLNIIEQARIGGLFLTGGDIATAVAGALGAEG--YRIQSEVAPCIPCGTFVNSE-- 390
            G +   ++ +A +    + GGD ++   G L  +    R+    +P  P  T  +++  
Sbjct: 357 -GSLLRELVTRAGLRRAVVAGGDTSSHALGQLSVDALTLRLPLPQSPGSPLCTAHSADPR 415

Query: 391 IDDLPVITKAGGFGSD 406
           +D + V  K G  G D
Sbjct: 416 VDGMEVALKGGQVGLD 431