Pairwise Alignments

Query, 1169 a.a., Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 951 a.a., restriction endonuclease subunit R from Ralstonia solanacearum IBSBF1503

 Score =  127 bits (318), Expect = 6e-33
 Identities = 157/602 (26%), Positives = 247/602 (41%), Gaps = 131/602 (21%)

Query: 281 AEWP-TGTDET-----------GKTGFADYVLFIG-LKPIAVVEAKRKNTDVSSKLNESY 327
           A WP TG D+T           GK G+ DYVL+    KP+A+VEA+       +    + 
Sbjct: 39  AGWPLTGPDDTAFPITGLPTPQGK-GYVDYVLWGDHRKPLAIVEARHTRRSARAGRQRAR 97

Query: 328 RYSKYFDNGFLRDTLLEHYAPDEVHDAVPEYEISWQDTSGKQRFKIPFCYSTNGREYRAA 387
           +Y+                                +  +G++    P  Y TNGR++   
Sbjct: 98  QYAD-----------------------------GLEAMTGQR----PLIYCTNGRDH--- 121

Query: 388 MKTKSGIWYRDVRHTTNMSKALPEWHRPEELLDMLGSDPQKQNQWFAENPGMSELGLRYY 447
                  W  D R  T   +A+  +HR +EL  ++  + + + Q  A     + +  R +
Sbjct: 122 -------WLWDDR--TCPPRAVWGFHRKDELERLI--ERRTRRQPLATAAIDTAIAERPH 170

Query: 448 QEDAVRAVEQAIVNGQ-QHILLAMATGTGKTRTAIALMFRLIQSQRFKRVLFLVDRRSLG 506
           Q  A+R + +A    + +  L++M +GTGKTR A+AL   L++    KR LFL DR +  
Sbjct: 171 QHRAIRRIAEAFEQDRLRGALVSMPSGTGKTRMAVALTDLLMRCHWIKRTLFLTDRAAQL 230

Query: 507 EQALGAFEDTRINGDTFNSIFDIKGLTDKFPEDSTKIHVA-TVQSLVKRTLQSDEPMPVG 565
           ++A  AF  T + G T   +       D  PE    +    T    +  T  +    P G
Sbjct: 231 QRAAAAFA-THLPGATLVDL-----AKDAVPEGDVCLSTCPTALGWLDGTDDAPRFGP-G 283

Query: 566 RYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYVSAYRRILDHFDAVKIALTATPA---- 621
            +D ++VD AHRG                       YR I  +FDA+ + LTA P     
Sbjct: 284 HFDLVIVDVAHRGICRQ-------------------YRAIFSYFDALLVGLTAMPKEAID 324

Query: 622 LHTVDIFGE----PVYRYTYRTAVIDGYLIDQDPP--IQIVTRNAQDGVYLSEGEQVERL 675
            +T D+FG     P   Y    A+ D +L+   PP  + +  R  ++ +   +    E+ 
Sbjct: 325 RNTYDVFGLAAGLPTEAYGLDEAIADHHLV---PPRTVSVPVRLQREAIRYDDLSDTEKD 381

Query: 676 NPQGELINDTLADDQDFEVADF----------NRGLVIPAFNRAVCGELTKYLDPTGQQK 725
                  +D  AD    E AD              LV+ A    V G      D  G  K
Sbjct: 382 QRDTLEWDDGNADASAPEAADAWLHHQDAVDEMIALVMEARGHRVAGG-----DWIG--K 434

Query: 726 TLVFCVTNAHADMVVDELRSAFKKKYPQLEHDAIIKITGDADKDAKKVQSMIVRFNKERL 785
           TL+F   + HA ++ +     F   YPQ + +    IT +A +    V +  V    +R+
Sbjct: 435 TLIFARNHGHAQLIAER----FDANYPQYKSELACVITYEAGQTQALVDAFSVA---DRM 487

Query: 786 PNIVVTVDLLTTGVDIPSICNIVFLRKVKSRILYEQMKGRATRLC-----PSVGKTSFKI 840
           P I ++  LL  G+ +P + N+VF R+V+SR  + +M G  TR C     P   K    +
Sbjct: 488 PRIAISAGLLDIGIAVPEVVNLVFFRRVRSRTRFWRMVGCGTRPCQDLYGPGQDKQDVLV 547

Query: 841 FD 842
           FD
Sbjct: 548 FD 549