Pairwise Alignments

Query, 120 a.a., hypothetical Na+/H+ antiporte (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 450 a.a., transporter, NhaC family (TC 2.A.35) from Kangiella aquimarina DSM 16071

 Score = 50.4 bits (119), Expect = 3e-11
 Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 7/111 (6%)

Query: 9   SALSLLPPVVAIVLAIVTRRVLFSLDLGIVIGVLLLYQFLALASAEFLFNNVKRLFGSEA 68
           S LS+LPP+VAI++A+  R+V+ +L + I    L+L     + +     + +  +F S  
Sbjct: 2   SWLSILPPIVAILIAVWKRQVIIALLMAIFTAELVLVGGNPIHAFTDTVDRLVSVFSS-- 59

Query: 69  GVNSWNLYILGFLIVLGMITALITVSGSARAFADW--ARLHIRNKRDAKLL 117
              ++N  IL F +++G +  LI +SG   A  +W   + ++ N+R A +L
Sbjct: 60  ---AYNTRILMFSLLIGALIQLIKISGGVSALVNWLTRKEYVHNQRRAGML 107