Pairwise Alignments

Query, 161 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 422 a.a., membrane integrity-associated transporter subunit PqiA from Dickeya dianthicola 67-19

 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 38/160 (23%), Positives = 78/160 (48%), Gaps = 18/160 (11%)

Query: 2   LALCITALVFYFPANFFPVLEIHFLGSIRTTTVFQGAFAVFDQGYWVVGIAVLAAAVVGP 61
           LAL +T+++ Y PAN  P++    LG   T+T+  G   ++D G W V + +  A+++ P
Sbjct: 258 LALLLTSVLLYVPANVMPIMVTEALGHRITSTIMSGVILLWDSGSWPVALVIFIASIMVP 317

Query: 62  GLLILSILIQLLIVKWGLDSPLGR--------HSLKQLLKFQGLLSQLTMLEIYVISFLV 113
            L       ++L + W      G         H + ++++F G   + +M++++VI+ L 
Sbjct: 318 TL-------KMLAMGWLCWCAYGSRRYDTERLHRVYEVVEFVG---RWSMIDVFVIAVLS 367

Query: 114 SSFQLSDFSDIYFGMGTFCFTMLFLVTLFLQREYDIEHMW 153
           +  ++     IY  +G   F  + ++T+     +D   +W
Sbjct: 368 AMVRMGRLMSIYPAIGAVLFATVVIMTMIAAMTFDPRLLW 407



 Score = 29.6 bits (65), Expect = 6e-05
 Identities = 32/151 (21%), Positives = 58/151 (38%), Gaps = 6/151 (3%)

Query: 3   ALCITALVFYFPANFFPVLEIHFLGSIRTTTVFQGAFAVFDQGYWVVGIAVLAAAVVGPG 62
           +   +AL+    +  FP + +   G     T+ +    +  + Y  +    L  + + P 
Sbjct: 54  SFAFSALIMLLLSMLFPFVSMSVAGIHSEITLLEIPRVMVAENYASMATLFLLFSQLVPA 113

Query: 63  LLILSILIQLLIVKWGLDSPLGRHSLKQLLKFQGLLSQLTMLEIYVISFLVSSFQLSDFS 122
             +  IL  LL ++  L   + R   K L +    L    M EI++   LVS  +L  + 
Sbjct: 114 CSMAVIL--LLCLRAPLPDAVRRLFTKTLFQ----LKSWGMAEIFLAGVLVSFVKLMSYG 167

Query: 123 DIYFGMGTFCFTMLFLVTLFLQREYDIEHMW 153
           DI  G     +    L+ L   +  D   +W
Sbjct: 168 DIGIGASFVPYIAFCLLQLLAFQSLDRRWLW 198