Pairwise Alignments

Query, 673 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 794 a.a., hypothetical protein from Pseudomonas sp. RS175

 Score = 86.7 bits (213), Expect = 4e-21
 Identities = 107/407 (26%), Positives = 172/407 (42%), Gaps = 34/407 (8%)

Query: 188 QQLQDKFQIQSNAIISSVESFQGTNLQQLVALASLFDNSEKVSENEFIQFGIRNQLQLDG 247
           QQL+ +F++Q+    S +E       Q+L +L   F NS  VS +EF  +    +  L  
Sbjct: 48  QQLRQRFELQAEERFSRIEERFQDQEQRLDSLRRFFANSSGVSSDEFHGYA---EALLRR 104

Query: 248 FRAWAWSPLVTLSDKNSFESATRDELGGAFNIKYLQDG---KPNAD-GWLAPVKYVQPLN 303
            +A+ W+P VT +++ +FE   R+E   AF+I+        +P A+ G   PV Y+Q   
Sbjct: 105 TQAFGWAPRVTGAERQAFELQAREEGLDAFSIREADGSGGLRPAAERGEYVPVLYIQSQP 164

Query: 304 SSRSVLGLDLNSEPVRAAAIAKVRATLAPVMTSKIQ-LAEDPNGPGGALLLVPSFDRVG- 361
           S  S LGLDL S+P R A + + R   A  ++  +  L  DP    G LL+ P       
Sbjct: 165 SFVSPLGLDLLSDPSRRAVLEQARQRDALAVSQPLDLLGGDPAFARGVLLVAPVTRAASR 224

Query: 362 NIKGFCSAVIDIESIIN---KVEQVKGLHWRLTDMSADGALLYANSQKKFPSFSGKLHSD 418
            + G+  A I +  ++         + L  R+ D+S D        +  F S      SD
Sbjct: 225 ELFGYVVAAISMRRLVGDGLPASNHENLSMRVLDLSGD-----VREEVLFDSPEPPGDSD 279

Query: 419 KSGQYYQAHLMLADRHWHIVIYESYAALMGETFSLSLLLLLLAFITCAVVSGMTLISSGE 478
            S       L L DR + + +  S   L     S+S L++L   ++  ++S +  +   +
Sbjct: 280 LSAVRL---LRLGDRDYRVELRPSRIFLSANHSSVSSLVVLGGLLS-FLLSALLYVLVSQ 335

Query: 479 RYRIADKVAEKTMALSKEIARNQAFQATLVESEEKYRNLFDKAPVGHVLKRLEDSQFVAI 538
           R R    V ++T  L    AR Q  + T      + R + D A    ++           
Sbjct: 336 RQRALTLVEQRTRELR---AREQELRGT----HSQLRGVLDAATQVAIIATDLRGVITTF 388

Query: 539 NQAFTEITGY-TLEELQALEPWDLTPVRYRASEAEQLERLKQTHRYG 584
           N     + GY + E LQ++    L   R   + A QL       RYG
Sbjct: 389 NAGAEHMLGYQSSEVLQSMTLESLHVPRELQARAAQL-----ASRYG 430