Pairwise Alignments

Query, 456 a.a., site-specific recombinase, phage integrase family (NCBI) from Shewanella oneidensis MR-1

Subject, 262 a.a., site-specific integrase from Magnetospirillum magneticum AMB-1

 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 63/263 (23%), Positives = 103/263 (39%), Gaps = 59/263 (22%)

Query: 166 LQSVFKLALRQGHCLTNPCIGIRQNKRRVLNRFLSVAEMQRLSVALDECEAVGGSIAQ-C 224
           +     LA R      N   G +        R+ S AE+ R+       EA+     Q  
Sbjct: 1   MSKALNLAKRWEWIAKNVAEGTQMYPEHPRKRYASPAELARV------LEAIANHPQQDS 54

Query: 225 ADVLRLLLLTGCRLSEITFLKGE--------------YVRGNELHL-PDSKTGAKVL--- 266
            D +RLL+LTG R  E+   + E              + + N+ H+ P S T  ++L   
Sbjct: 55  CDAIRLLILTGARKGEVFTARWEDIDLDAGIWSKPSAHTKQNQEHIAPLSGTAIQLLKRR 114

Query: 267 ---------YIGQAA-----VDILSRYHC--KANTELFPMKQGASTSLVQSLWLRLRKQI 310
                    + G+ +      D+   +    KA T     +  +  +++  L   L++  
Sbjct: 115 KETAAGQWVFPGRVSSDEHITDVKKTWDACRKAATLALWRESPSIAAIIDGLHADLKRAP 174

Query: 311 GVE------------------DVRLHDLRHTFASYAVMDGCSIPMVASLLGHKKVTMTLR 352
            +E                  D+R+HDLRHT+AS        + +V +LLGH +   TLR
Sbjct: 175 TIEEIQAATKPQNEDLPKGSLDLRIHDLRHTYASMLASKKVPLQVVGALLGHTQAQTTLR 234

Query: 353 YTHVGDDSVEQASEVIGAVFKGI 375
           Y H+ DD + +A+E       GI
Sbjct: 235 YAHLYDDPLREATEFAATAISGI 257