Pairwise Alignments

Query, 456 a.a., site-specific recombinase, phage integrase family (NCBI) from Shewanella oneidensis MR-1

Subject, 400 a.a., tyrosine-type recombinase/integrase from Dickeya dianthicola 67-19

 Score =  105 bits (262), Expect = 3e-27
 Identities = 106/396 (26%), Positives = 166/396 (41%), Gaps = 15/396 (3%)

Query: 1   MKIVKLTQVFIRSLARQTRAYTIQDSLCHGLGVKVMPDKPMQYVIS-RLIDNRTRTRILA 59
           M  +KLT+  + +   Q +A  ++D+L  G   K+ P     +++  R      R   L 
Sbjct: 1   MAKIKLTKSAVDAAQPQAQAIELRDTLVPGFLCKITPTGRKVFMLQYRTNAGERRKPALG 60

Query: 60  PVSALTVKAAREKATGQLQAWREEHTQPSMSASPRFDVFVEQTWKPMIFEHWK----PST 115
               LTV+ AR  A   L   R      +  A  R    VE+  K  + ++ K    PST
Sbjct: 61  LFGELTVEQARSLAQEWLAQVRRGGDPAADKAEARQAPTVEELCKKFMEDYSKKRNKPST 120

Query: 116 KRSVLPALNRRLLAHFGRYPLHMINHKMVQAWFDEISKTRKGAANRNLDTLQSVFKLALR 175
           +      ++R ++   GR  +H +    V    +++S  ++  AN+    L+ +F +A  
Sbjct: 121 RVGYQGVMDRCIIPLLGRKKVHDVKRPDVAGLMEKLSY-KQTEANKAFSILRKMFNMAEV 179

Query: 176 QGHCL--TNPCIGIRQNKRRVLNRFLSVAEMQRLSVALDECEAVGGSIAQCADVLRLLLL 233
            G+    TNPC  +           +S  +M +L   LD+ EA G         +RL   
Sbjct: 180 WGYRPDGTNPCRHVPMFPAGKSTHLISDDDMGKLFRQLDKIEAEGLENYVVPLAIRLQFE 239

Query: 234 TGCRLSEITFLKGEYV--RGNELHLPDSKTGAKVLYIGQAAVDILS---RYHCKANTELF 288
              R SEI  L+ E+V      +  PDSKTG     + + A  +LS   R+         
Sbjct: 240 FAARRSEIVTLEWEWVDLENRRVVWPDSKTGGMSKPMSEEAYRLLSTAPRHEGNPYVLPS 299

Query: 289 PMKQGAS--TSLVQSLWLRLRKQIGVEDVRLHDLRHTFASYAVMDGCSIPMVASLLGHKK 346
           P  QG S  T      W R  K  G   V  H +RH  A+     G  + +  +L  HK 
Sbjct: 300 PRHQGKSLTTGEYYGGWCRALKAAGATHVGTHGIRHRSATDIANSGIPVKVGMALTAHKT 359

Query: 347 VTMTLRYTHVGDDSVEQASEVIGAVFKGIFTQPEPP 382
           V M +RY H  DD V +A+E++ +  K I    +PP
Sbjct: 360 VVMFMRYVHTEDDPVREAAELVASRRKRITGAKQPP 395