Pairwise Alignments

Query, 456 a.a., site-specific recombinase, phage integrase family (NCBI) from Shewanella oneidensis MR-1

Subject, 411 a.a., tyrosine-type recombinase/integrase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  150 bits (378), Expect = 1e-40
 Identities = 115/385 (29%), Positives = 188/385 (48%), Gaps = 23/385 (5%)

Query: 5   KLTQVFIRSLARQTRAYTIQDSLCHGLGVKVMPDKPMQYVIS-RLIDNRTRTRILAPVSA 63
           K+T+  + +L  +   +T+ D+   G GV+V       YV+  R I    R   +A    
Sbjct: 9   KITKRLVDALTSEGVRFTLWDTQLKGFGVRVAVSDTKTYVVRYRTIGGADRLLHIARHGV 68

Query: 64  LTVKAAREKAT---------GQLQAWREEHTQPSMSASPRFDVFVEQ---TWKPMIFEHW 111
           +T + ARE+A          G  Q  + E  +  ++ S   D+++++     K       
Sbjct: 69  VTAEEARERAAAVLAEVASGGDPQGTKVERRE-ELTMSELCDLYMKEGVTMKKATTLRID 127

Query: 112 KPSTKRSVLPALNRRLLAHFGRYPLH--MINHKMVQAWFDEISKTRKG--AANRNLDTLQ 167
           +    R + P L +  +   GR  +   M++    +   +    TR G  AA+R +  L 
Sbjct: 128 RIRIARHIKPRLGKMKVTDIGRADIERLMVDVGSGRIRGEATPHTRGGIHAASRTVGLLG 187

Query: 168 SVFKLALRQGHCLTNPCIGIRQNKRRVLNRFLSVAEMQRLSVALDECEAVGGSIAQCADV 227
            +F  A+ +    TNP  G+++ K    +RFLS AE+ RL   L E E  GG   +  ++
Sbjct: 188 GIFTFAVEREFVKTNPTRGVKRYKDNRRDRFLSPAELARLGDVLAELEKHGGD-PRHINI 246

Query: 228 LRLLLLTGCRLSEITFLKGEYVRGNE--LHLPDSKTGAKVLYIGQAAVDILSRYHCKANT 285
           +RLL LTG R +EI  LK   +      L L DSKTGAKV+ +G AA+ ++       + 
Sbjct: 247 IRLLALTGARKNEIARLKWSEIDRTMGMLRLEDSKTGAKVIRLGSAALKLIEGLLSNGSI 306

Query: 286 ELFPMKQGASTSLVQS--LWLRLRKQIGVEDVRLHDLRHTFASYAVMDGCSIPMVASLLG 343
            +FP ++     +      W+ +RK+ G+ED+R+HDLRH+FAS  +  G  + ++  LLG
Sbjct: 307 YVFPDRKDPKRPIANLDWAWVGIRKRAGMEDLRIHDLRHSFASAGLAGGEGLQLIGKLLG 366

Query: 344 HKKVTMTLRYTHVGDDSVEQASEVI 368
           H  V+ T RY H+ DD V  A++ I
Sbjct: 367 HSHVSTTSRYAHLADDPVRAAADRI 391