Pairwise Alignments

Query, 376 a.a., site-specific recombinase, phage integrase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 410 a.a., DUF4102 domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 58.5 bits (140), Expect = 3e-13
 Identities = 87/406 (21%), Positives = 166/406 (40%), Gaps = 37/406 (9%)

Query: 5   KLQQSMIDNLPTPQKITVFYDKYFPAFFMRAYPSGIRCYYVRFQYQGLR--QLHVIGNAN 62
           +L Q+  +++   +K   ++D   P F +   PSG + +  + + +G R  +   +G   
Sbjct: 4   QLSQAFAESVKPTEKREYYWDLDIPGFGLLVLPSGRKSWLYQSKLKGSRTDKRITLGTFP 63

Query: 63  DITLDDARLEARKHIDALRYGV--VSEPVPSLTLCAFAEEFFPRYAR--HWKPSTLLNSQ 118
            +    AR +A K+   ++ G     E       C+  ++ F  Y +    KP T  N  
Sbjct: 64  IMEFTKARGDAIKYAGVVQNGGNHAVEKEEEAIRCSTVKDVFEFYVKMGKMKPQTRKNVT 123

Query: 119 RGFTRHIAPVLGDVPLAALTRQHIEQWFDG-MHASKGMANRLLPLLSVMMQQAEVYEYRP 177
                H+   LG +    LT+ +  +W +     + G A  L+         A      P
Sbjct: 124 AHCENHVYSKLGSMRYFDLTKPYFIRWLEANFKDAPGTAYNLILHTRSAYNFARGRGAIP 183

Query: 178 AQS-NPCKGFKRY--------KSTHSERYLSEEELKRLWLALD---SHEKASPVAVMVLR 225
           A++ NP     R         K+      + + EL  L  A+    +H   +P+ V ++ 
Sbjct: 184 AETVNPAAAVVREGGLTISLKKTAGYAMAMEDAELTDLLNAIREAYNHRDFNPINVAMIE 243

Query: 226 LLILTGCRCNEVCSVKW--ADYRQGHWYLPDSKTGA-----KTVFLSSFARELLSDWPQV 278
           L++ TG R  E+ S+++   D  +      + KT       +T++LS  A  +L    + 
Sbjct: 244 LILSTGARKGEILSLRFDEIDLEKRTITKINHKTSETSLMPRTIYLSDHALSVLDRAAEA 303

Query: 279 SEHLFWHQSPSQPFTPACLDRFW-----RPFRETIHL---NDVRIHDLRHTYASIAVKHN 330
            + +   ++ S+   PA   R       RP     +L     ++ H+LR  Y ++A+   
Sbjct: 304 RKTM--RRNSSEWVFPATRGRGHSSDANRPVTAIGNLCGFPSLKPHNLRSLYINVAIDSG 361

Query: 331 INILTIGRLLGHALPETTLK-YTHLAKRDVQQAANVVSQLIAGEMQ 375
           + +  + + +GH+  +TTLK Y    K  + + AN V   +A   Q
Sbjct: 362 VPLPVVSQNVGHSTVDTTLKHYLKNKKSSLLEGANGVGIKLASLAQ 407