Pairwise Alignments

Query, 376 a.a., site-specific recombinase, phage integrase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 381 a.a., DUF4102 domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 87.8 bits (216), Expect = 4e-22
 Identities = 89/385 (23%), Positives = 174/385 (45%), Gaps = 26/385 (6%)

Query: 4   IKLQQSMIDNLPTPQKITVFY--DKYFPAFFMRAYPSGIRCYYVRFQYQ-GLRQLHVIGN 60
           +KL  + +  L  P+  +  Y  D   P F +    +  + + V+F  + G  + H IG 
Sbjct: 3   LKLSAAKLKTLTVPEGKSGEYVWDTSLPGFGVYVGKTA-KTFLVQFTTRAGEEKRHKIGR 61

Query: 61  ANDITLDDARLEARKHIDALRYGVVSEPVPSLTLCA----FAEEFFPRYARH-WKPSTLL 115
           ++ ++ D AR EA + +  ++ G  ++P  ++         +EE    +  H  K ST  
Sbjct: 62  SDVLSYDAARQEALRVLGEVQKG--ADPTAAIKQARQEGPLSEELVNWFDSHTMKDSTRK 119

Query: 116 NSQRGFTRHIAPVLGDVPLAALTRQHIEQWFDGMHASKG-MANRLLPLLSVMMQQAEVYE 174
             +     H+ P LG    + +T+  I   +  + A  G  AN+ + +LS    +    +
Sbjct: 120 TWRSVVNNHLIPALGSRKPSTITKADILAAYRDIQAKSGRQANQAIIILSTFYNRTTDGK 179

Query: 175 YRPAQS-NPCKGFKRYKSTHSERYLSEEELKRLWLALDSHEKASPVAVMVLRLLILTGCR 233
           + PA      K  ++++    E  LS+++++ L    D  +  +  +    RLL  TG R
Sbjct: 180 FNPASDFRNDKSIRKHRDAEREVVLSQDQVRALLADFD--KSPAQQSADAARLLFYTGAR 237

Query: 234 CNEVCSVKW--ADYRQGHWYLPDSKTG---AKTVFLSSFARELLS----DWPQVSEHLFW 284
             E+ +++W   +  QG   L  + T    AKT+ LS  A+ +L     +  + +E++F 
Sbjct: 238 IGEILALRWDAVNLTQGTITLAHTMTKEAKAKTLHLSPRAQAILERRQEEALEGAEYVFP 297

Query: 285 HQSPSQPFTPACLDRFWRPFRETIHLNDVRIHDLRHTYASIAVKHNINILTIGRLLGHAL 344
            +          +  FW+   +   +  V IHD+R TY++I +    +   +G+ +GHA 
Sbjct: 298 GRDGEAH--QVVIKAFWKAACKRCGIEGVHIHDIRATYSTILIASGESAKAVGKTMGHAD 355

Query: 345 PETTLKYTHLAKRDVQQAANVVSQL 369
            +TT++Y  +A+   +  A+ V  L
Sbjct: 356 TKTTMRYERIAQDRAKDIASKVDDL 380