Pairwise Alignments

Query, 376 a.a., site-specific recombinase, phage integrase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 322 a.a., site-specific integrase from Magnetospirillum magneticum AMB-1

 Score = 47.4 bits (111), Expect = 6e-10
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 13/133 (9%)

Query: 233 RCNEVCSVKW--ADYRQGHWYLPDS--KTG-AKTVFLSSFARELLSDWPQ-VSEHLFWHQ 286
           R NE+  ++W   D   G   LP +  KTG ++ V LS    ++L   P+ +   +F   
Sbjct: 184 RRNEIVQMRWEHVDLNAGMVRLPAAITKTGVSRDVALSPAGVQVLRTLPRSIDGRVF--- 240

Query: 287 SPSQPFTPACLDRFWRPFRETIHLNDVRIHDLRHTYASIAVKHNINILTIGRLLGHALPE 346
               P T   L R +   R+   L+D+  HDLRH  AS   +  ++++ I  + GH   +
Sbjct: 241 ----PLTADALYRAFVRARKRAGLDDLHFHDLRHEAASRLREEGLDLMEIASITGHKTLQ 296

Query: 347 TTLKYTHLAKRDV 359
              +Y H+  +DV
Sbjct: 297 MLKRYVHVKAKDV 309