Pairwise Alignments

Query, 376 a.a., site-specific recombinase, phage integrase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 344 a.a., tyrosine-type recombinase/integrase from Dickeya dianthicola 67-19

 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 22/215 (10%)

Query: 119 RGFTRHIAPVLGDVPLAALTRQHIEQWFDGMHA-SKGMANRLLPLLSVMMQQAEVYEYRP 177
           RG+ R +    G +  + +  QHI ++ D     S   ANR    +S + + A  YE   
Sbjct: 88  RGYARKVLKPFGRMAPSDIQPQHIRKYMDKRGLKSTVQANREKAFMSRVFRWA--YERGI 145

Query: 178 AQSNPCKGFKRYKSTHSERYLSEEELKRLWLALDSHEKASPVAVMVLRLLILTGCRCNEV 237
            + NPC G ++Y  T  +RY++++E + L      +E A  +  + + +  L   R  +V
Sbjct: 146 VKINPCHGVRQYTETPRDRYITDKEYQAL------YESADLLVRIAMEISYLCCARQGDV 199

Query: 238 CSVKWADYRQGHWYLPDSKTGAKTVFLSS-------FARELLSDWPQVSEHLFWHQSPSQ 290
            +++         Y+   KTG K +   S            L     V       QS   
Sbjct: 200 LALRRDQLLDEGIYIRQGKTGVKQIKAWSPRLRAAVAMSHALGAGTGVVSTFILRQSSGG 259

Query: 291 PFTPACLDRFWRPFRETIHLN------DVRIHDLR 319
            +T A     WR  +E    N      D   HDL+
Sbjct: 260 RYTAAGFANHWRKAKEEAVKNYPELDFDFTFHDLK 294