Pairwise Alignments

Query, 513 a.a., ATP synthase F1, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 510 a.a., F0F1 ATP synthase subunit alpha from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  580 bits (1494), Expect = e-170
 Identities = 303/519 (58%), Positives = 392/519 (75%), Gaps = 20/519 (3%)

Query: 1   MQLNSTEISDLIKQRIEQFEVVSESRNEGTIVAVSDGIIRIHGLADVMQGEMIELPGSRF 60
           M + + EIS ++K +I  F V ++  + G++++V DGI RIHGL +V  GEM+E   +  
Sbjct: 1   MDIRAAEISAILKSQIANFGVEADVSDVGSVLSVGDGIARIHGLDNVQAGEMVEFTKAGV 60

Query: 61  -AIALNLERDSVGAVVMGPYADLAEGVKVKTTGRILEVPVGRGLLGRVVNTLGEPIDGKG 119
             +ALNLERD+VGAV+ G  A +AEG  V+  G I++VPVGRGLLGRVVN LGEPIDGKG
Sbjct: 61  KGMALNLERDNVGAVIFGADAAIAEGDDVRRLGEIVDVPVGRGLLGRVVNPLGEPIDGKG 120

Query: 120 AIDNDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDAMIPIGRGQRELIIGDRQTGKTAMA 179
            I+      V+V APG+I RKSV +P+QTG KA+D +IP+GRGQRELIIGDRQ GKTA+A
Sbjct: 121 PIEFTERRRVDVKAPGIIPRKSVHEPMQTGLKAIDTLIPVGRGQRELIIGDRQVGKTAVA 180

Query: 180 IDAIINQRD--------SGIKCVYVAVGQKASTIANVVRKLEEHGALANTIVVVATASEA 231
           ID I+NQ++        + + C+YVA+GQK ST+A +V+ LEE GAL  TIVV  TASE 
Sbjct: 181 IDTILNQKNVNKTDDESAKLYCIYVAIGQKRSTVAQIVKTLEEAGALEYTIVVACTASEP 240

Query: 232 AALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVF 291
           A LQ+LAP++G AMGE+FRD G  ALIVYDDLSKQAVAYRQ+SLLL+RPPGREAYPGDVF
Sbjct: 241 APLQFLAPFAGTAMGEFFRDNGMHALIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 300

Query: 292 YLHSRLLERASRVNEEYVEKFTKGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDG 351
           YLHSRLLER++++NE+Y            +GS+TALPIIETQA DVSA++PTNVISITDG
Sbjct: 301 YLHSRLLERSAKLNEDY-----------GSGSMTALPIIETQANDVSAYIPTNVISITDG 349

Query: 352 QIFLETDLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFSQFAS 411
           QIFLE+DLF  G+RPAVN GISVSRVG +AQTK +KK++G I+  LAQYRE+AAF++F S
Sbjct: 350 QIFLESDLFYQGIRPAVNVGISVSRVGSSAQTKAMKKVAGSIKGELAQYREMAAFAKFGS 409

Query: 412 DLDDATRAQLEHGVRVTELMKQKQYAPMSVAAQAVSIFAAEKGYLKGVELKKVGDFEAAL 471
           DLD +T+  L  G R+TEL+KQ QY+P+++  Q VS++A  +GY+ G+ +  VG FE  L
Sbjct: 410 DLDASTQKLLARGARLTELLKQPQYSPLAMEEQVVSVYAGTRGYIDGIAVGDVGRFEKEL 469

Query: 472 LSYMNSEHAALIKLINETGDYNADIEAELKAGLDKFVAT 510
           L+ +++ HA+L++ I    D  +D+EAELK  L  FV T
Sbjct: 470 LARIHANHASLLEGIRTKKDLTSDLEAELKDILAAFVKT 508