Pairwise Alignments

Query, 690 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 710 a.a., putative TonB-dependent ferric siderophore receptor from Pseudomonas putida KT2440

 Score =  184 bits (468), Expect = 1e-50
 Identities = 173/649 (26%), Positives = 277/649 (42%), Gaps = 54/649 (8%)

Query: 43  LMDTPQSVNVIPDFVTDEQLATNLAEVLVNDSSVTAGTTRWNR-QVFSIRGFELDSGNGY 101
           L+DTP SV+V    + +++    L+EVL +D+SV          + F++RGFEL++ + Y
Sbjct: 61  LLDTPASVSVFSQQLLEDRQVRKLSEVLQSDASVGESYAPIGYYENFNVRGFELNAASSY 120

Query: 102 LINGHQQWSHYVQPIETLQQVEVLKGPSSMLYGQSGPGGLVNMVTKKPTYDSMLDLGFDT 161
            ING          +E  QQVE+LKG S +  G S PGGL+N VTK+   + +  +   T
Sbjct: 121 RINGQTIAGEQNVALENKQQVELLKGLSGLQTGVSEPGGLINYVTKRA--EDIRSVTVST 178

Query: 162 DGYGSTRAQLDAGGSLNEAQSIRYRGVLVKQDTKYWREYSTTDENQERDRWLGYLNLEFD 221
           +  G      D GG     +    R  L  +D +      T  ++ +  R    L  ++ 
Sbjct: 179 NEQGERYLATDLGGWFGSEKQFGLRANLAHEDIR------TYVDHADGKRDFASLAFDWQ 232

Query: 222 ISDD--LLLSVKYDHTQDKA--GIDAGGWLDKQGNVIGERKTVWDAPWAFTDNTVSNLGA 277
           I+ D  L L  +Y H +  +  G    G  D    +  E +  +        N   NLG 
Sbjct: 233 INPDATLQLDAEYQHREQASVPGYQLLGGTDVPHGIDPEDRLAYQHWAKPVQNDSLNLGG 292

Query: 278 DLTWQMTNDWKVKVGYNDQQFNRQRLDSAPSLIEGSEDPFKDG----YNIKPFDRYDDWQ 333
              ++  + W    G      ++  +D   +   GS +    G    Y+I  F   DD +
Sbjct: 293 RFEYRFNDTW---TGTVSASRSKVVIDDYSAFAWGSSEGAFFGSNGDYDIYDFRSPDDTR 349

Query: 334 H-KTAYVDFTGEFSLAGMEHQFLIGAN----YLDY--FYQQQIQKGKSQRVIPGQPIIQQ 386
               A     G F   G+ H+  +G +     LD   +Y + +  G    +  G P ++ 
Sbjct: 350 RTDEAQAMLNGHFDALGVGHELTVGTSAQRRTLDQRPYYNEWLGTG---NIHTGAPDLEP 406

Query: 387 DLDYHQGQLSNPSEYKYYGFYLQDLMTLNEQWKLLAG---VRYDEQKKDTAG-----GNS 438
             D   G      + + YG ++ D ++LNEQW+ + G   VR DE+  D  G        
Sbjct: 407 S-DKPVGASERRLDSRQYGLFVSDRISLNEQWQTVLGAREVRLDEKTWDENGVAGRHTRQ 465

Query: 439 YAVSPKFGVIYSPMDNGSIYVNYSKSFTPQGSVTSSEDVNQGANLKPEYGTQYELGTKWE 498
           Y + P   +IY P  N ++Y +Y+K  +  G+       N    L P    Q ELG K +
Sbjct: 466 YELLPNAALIYKPQPNTTVYASYAKGLSAGGTAPWFAS-NAAEILAPTTSRQLELGVKHD 524

Query: 499 LFNDSLLLTAALFDITVSNVTTVLDIPVTSDGDKTIT-TQGGEQHHRGFEVGAQGQLGDS 557
                L L+AALF I  +            DG    T  Q G+Q + G E+GA G++  +
Sbjct: 525 W--QGLSLSAALFQIRQAYQY------ARPDGTGNFTYVQQGQQKNTGLELGASGRVTPN 576

Query: 558 WFVTSSMMYLDAEYNTGAGKIGGKNLDGKTPIDAPKWSANIWTRYEV-TDNFAMNFGAIY 616
             V +S   + A         G +  +G   I+ PK+ A +   Y +     A+  GA Y
Sbjct: 577 LQVQASAAAIRARVQNS----GTEAYEGHQAINVPKFRAALHAEYTLPVPGLALLGGARY 632

Query: 617 VGERFANDVNTITKDGYVRFDVGAAYTTDIMGKDVSIRANVRNLFDTEY 665
              ++A+    +   GY  FD+G+ Y+T + G D  +R  V N+ D  Y
Sbjct: 633 SASKYASQAGNVEVGGYTVFDLGSRYSTRVAGYDTVLRLTVDNVLDKRY 681