Pairwise Alignments

Query, 690 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 722 a.a., TonB-dependent receptor from Dickeya dadantii 3937

 Score =  221 bits (564), Expect = 7e-62
 Identities = 184/703 (26%), Positives = 297/703 (42%), Gaps = 65/703 (9%)

Query: 21  TGRTFNDYKVGSASGAMRGDIDLMDTPQSVNVIPDFVTDEQLATNLAEVLVNDSSVT-AG 79
           +G     Y+  +A    R D  L+D PQ+VNV+P  V ++Q A NL E L N S +T A 
Sbjct: 52  SGARETGYQPHNAVTGTRTDSRLLDIPQAVNVVPQQVLEDQAARNLDEALYNVSGITQAN 111

Query: 80  TTRWNRQVFSIRGFELDSGNGYLINGHQQWSHYVQPIETLQQVEVLKGPSSMLYGQSGPG 139
           T    +     RGF  D+ +G ++    +         T ++VEVLKGP+SMLYG   PG
Sbjct: 112 TLGGTQDAVMKRGFG-DNRDGSILRDGMRSIQARNVTPTTERVEVLKGPASMLYGWGEPG 170

Query: 140 GLVNMVTKKPTYDSMLDLGFDTDGYGSTRAQLDAGGSLNEAQSIRYRGVLVKQDTKYWRE 199
           G++N+++KKP       +      +     QLD  G L     + YR ++   +T YWR 
Sbjct: 171 GMINIISKKPELVQKTHIEGWNSSFNGGGGQLDVTGPLG-TSGLAYRMIVDHDETDYWRN 229

Query: 200 YSTTDENQERDRWLGYLNLEFDISDDLLLSVKYDHTQDKAGIDAGGWLDKQGN--VIGER 257
           +    +       + Y        ++  + V Y+H +     D G  +D +    V   R
Sbjct: 230 FGRNRQTTIAPSLMWY-------GENTTVWVSYEHMEYLTPFDRGTVIDSRTGKPVNTPR 282

Query: 258 KTVWDAPWAFTDNTVSNLGADLTWQMTNDWKVKVG-------YNDQQFNRQRLDSAPSLI 310
           +  +D  +  T      L   +   + + WK K+        YND Q     L+     +
Sbjct: 283 ERRFDEAYNATRGDQDTLTFQMESAINDRWKTKLNYAYSRNTYNDNQARAMSLNPTTGFL 342

Query: 311 EGSEDPFKDGYNIKPFDRYDDWQHKTAYVDFTGEFSLAGMEHQFLIGANY-LDYFYQQQI 369
               D  +D ++          Q +   +   G+     + HQ L G ++  D  ++  +
Sbjct: 343 TRRADATQDAHS----------QSQNVQLTLNGDIDWGSINHQLLFGFDHEADRTHRGNM 392

Query: 370 QKGKSQRVI----PGQPIIQQDLDYHQGQLSNPSEYKYYGFYLQDLMTLNEQWKLLAGVR 425
            +GK+        P         D    +     +    G ++QD + L+E W LL GVR
Sbjct: 393 IRGKNNSSFNIYNPVYGRFPASSDIIAAESDQKEDVDSTGVFMQDAIRLDEHWMLLGGVR 452

Query: 426 YDEQKKDTAGGNSYAVS---------PKFGVIYSPMDNGSIYVNYSKSFTPQGSVTSSED 476
           YD     +  G  +  +         P+ GV+Y+     S+Y +YS+SF P  +V  +  
Sbjct: 453 YDRFDVMSGKGRPFVTNTDRSDSRLVPRAGVVYNLTSYASLYTSYSESFKPNSAVNKA-- 510

Query: 477 VNQGANLKPEYGTQYELGTKWELFNDSLLLTAALFDITVSNVTTVLDIPVTSDG-DKTIT 535
              GA ++PE G  YE+G K +L N  +    ALFDI   NV  ++D   T +G  +T+T
Sbjct: 511 --IGATMEPEVGRSYEVGAKLDLPN-RITANLALFDIQKRNV--MVDEQQTINGISETVT 565

Query: 536 TQGGEQHHRGFEVGAQGQLGDSWFVTSSMMYLDAEYNTGAGKIGGKNLDGKTPIDAPKWS 595
              G+   +G EV   G+L DS  +  +  + DA   +           G    +  + +
Sbjct: 566 RTAGKVRSQGVEVDVAGKLTDSLSLIGAYAFTDARVTSDPTN------QGNEMANVARHT 619

Query: 596 ANIWTRYE-------VTDNFAMNFGAIYVGERFANDVNTITKDGYVRFDVGAAYTTDIMG 648
           A+++   +         D+     GA YVG R  +  N+   D Y   D   AY+  + G
Sbjct: 620 ASLFLTNDFGNLGLHAGDDLRAGVGARYVGRRPGDAANSFFLDDYTVADAFIAYSVPLNG 679

Query: 649 KDVSIRANVRNLFD-TEYLDGGSDKMVTIGQDRNFSVALEAKF 690
             V  + N++NLFD T Y   GS + V IG  R   +     F
Sbjct: 680 YKVKWQLNIKNLFDKTYYPSSGSSQYVAIGDPREVVLRASVDF 722