Pairwise Alignments

Query, 256 a.a., transcriptional regulator, DeoR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 257 a.a., DeoR/GlpR transcriptional regulator from Serratia liquefaciens MT49

 Score =  159 bits (401), Expect = 7e-44
 Identities = 102/260 (39%), Positives = 152/260 (58%), Gaps = 20/260 (7%)

Query: 5   NTQQRRHSIISILNEQGEVSVDELSLRFETSEVTIRKDLAELEKTGLLLRRYGGAVAIPD 64
           NT +RR  II +L E G V V++LS +F  S VTIR DL  LE+ G  LR YGGA+    
Sbjct: 4   NTAKRREHIIDLLCEHGSVRVEQLSKQFAVSTVTIRNDLRFLERKGCALRAYGGAM---- 59

Query: 65  EVTQQFSAKIAPN---------KLSIAKAAAQLIKDHNRIIIDSGTTTSGLIAELNQKRG 115
            + QQF+     +         K  IA  AA  ++D + +I+DSG+TT+ ++  L  +R 
Sbjct: 60  -LNQQFAFDRPLHDKGRLNRDVKSQIASVAASYVRDGDALILDSGSTTTQIVPFLKGRRD 118

Query: 116 LVVMTNALHLANAIHELENEP--TLLMTGGTWDPHSESFQGQVAEQVLRSYNFDQLFIGA 173
           LVVMTNAL++A   +EL       +++ GG+   +S S  G  AEQ LR Y FD+LF+G 
Sbjct: 119 LVVMTNALNIA---YELSGNDGVEVMVLGGSVRRNSYSLYGPAAEQQLRQYRFDKLFLGV 175

Query: 174 DGIDLARGTTTFNE-LTGLSKVMAEVSREVIVMVDSDKIGKRIPNLELPWSKISVLVTDA 232
           DG DL  G TT +     L++VM EV+RE+I + D+ K G++   +     +I  L+TD+
Sbjct: 176 DGFDLVAGITTPHPGEAHLNRVMCEVAREIIAVADASKFGRKSFCMIREAGQIHRLITDS 235

Query: 233 RIEESALKQITEQGVKVILA 252
            + +   + +TE GV+V++A
Sbjct: 236 LLPDDYERALTELGVEVVIA 255