Pairwise Alignments

Query, 256 a.a., transcriptional regulator, DeoR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 256 a.a., DeoR/GlpR transcriptional regulator from Serratia liquefaciens MT49

 Score =  161 bits (407), Expect = 1e-44
 Identities = 105/253 (41%), Positives = 148/253 (58%), Gaps = 6/253 (2%)

Query: 5   NTQQRRHSIISILNEQGEVSVDELSLRFETSEVTIRKDLAELEKTGLLLRRYGGAVAIP- 63
           NT +RR  II  L  +G V V++LS +F  S VTIR DL +LEK+G  +R YGGA+    
Sbjct: 3   NTVKRRELIIDQLCREGSVRVEQLSAQFSVSSVTIRSDLRQLEKSGCAVRAYGGAMLNKQ 62

Query: 64  ---DEVTQQFSAKIAPNKLSIAKAAAQLIKDHNRIIIDSGTTTSGLIAELNQKRGLVVMT 120
              D   Q         K +IA AAA+L+ D + II+DSG+TTS +  +L  K+ LVVMT
Sbjct: 63  FAFDRPLQDKGRINRDVKYAIACAAAELVNDGDAIILDSGSTTSQMAQQLVGKKDLVVMT 122

Query: 121 NALHLANAIHELENEPTLLMTGGTWDPHSESFQGQVAEQVLRSYNFDQLFIGADGIDLAR 180
           NAL++A  +   E +  L++ GG+    S S  G  AEQ +R + FD+LF+G DG DL  
Sbjct: 123 NALNIAFELANNE-QVDLMVVGGSVRRKSWSLYGPAAEQHMRQFRFDKLFLGVDGFDLLS 181

Query: 181 GTTTFNE-LTGLSKVMAEVSREVIVMVDSDKIGKRIPNLELPWSKISVLVTDARIEESAL 239
           G TT +     L++ M +V+REVI + D+ K G+    +     +I  LVTD+RI E+ L
Sbjct: 182 GITTPDPGEAQLNRAMCDVAREVIAVADASKFGRTSFCMIREIGQIQHLVTDSRIPENYL 241

Query: 240 KQITEQGVKVILA 252
             +   GV VI+A
Sbjct: 242 HALNHLGVDVIIA 254