Pairwise Alignments

Query, 256 a.a., transcriptional regulator, DeoR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 257 a.a., sorbitol-inducible srl operon transcriptional repressor from Escherichia coli BL21

 Score =  199 bits (505), Expect = 6e-56
 Identities = 106/248 (42%), Positives = 155/248 (62%), Gaps = 3/248 (1%)

Query: 7   QQRRHSIISILNEQGEVSVDELSLRFETSEVTIRKDLAELEKTGLLLRRYGGAVAIPDEV 66
           +QR+ +I+  L +QG+ SV+EL+  F+T+  TIRKDL  LE  G ++R YGG V   +E 
Sbjct: 4   RQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGVVLNKEES 63

Query: 67  TQQFSAKIAPN---KLSIAKAAAQLIKDHNRIIIDSGTTTSGLIAELNQKRGLVVMTNAL 123
                 K   N   K  IA+AA   I D + II+D+G+T   ++  L++   + VMTN+L
Sbjct: 64  DPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSL 123

Query: 124 HLANAIHELENEPTLLMTGGTWDPHSESFQGQVAEQVLRSYNFDQLFIGADGIDLARGTT 183
           H+ NA+ EL+NE T+LM GGT+   S SF GQ+AE     + FD+LF+G DGIDL  G T
Sbjct: 124 HIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDLNAGVT 183

Query: 184 TFNELTGLSKVMAEVSREVIVMVDSDKIGKRIPNLELPWSKISVLVTDARIEESALKQIT 243
           TFNE+  +SK M   +REVI+M DS K G++ PN+      +  L+TDA I+ +  + + 
Sbjct: 184 TFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAFRQALE 243

Query: 244 EQGVKVIL 251
           E+G+ VI+
Sbjct: 244 EKGIDVII 251