Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 615 a.a., Uncharacterized protein conserved in bacteria from Kangiella aquimarina DSM 16071

 Score =  397 bits (1020), Expect = e-115
 Identities = 221/600 (36%), Positives = 343/600 (57%), Gaps = 12/600 (2%)

Query: 8   SLLICVLSACSTAKPPAES--ASQTAVAITQSSVKTMAPALQAIVDQSWQLQLSASPEMA 65
           S+ +   SA   A P   S  +S+ AVA  Q   +T A    AI  + W+  L  +P MA
Sbjct: 15  SIAMAFSSATVLANPTTVSFLSSENAVAAQQ---QTEAEKAAAIYAEHWERSLEMNPLMA 71

Query: 66  YGMGDKSAAGKLQDL-SPEALAKLNQGQIAILVQLKALDRSKLSKEDKINAQILEDQLQN 124
             MGD     +L D  + E  AK        L ++  +D SKL  +D ++ ++ + + + 
Sbjct: 72  TFMGDNRFNDQLGDWGTEEGRAKELAFSKEFLAKINTIDSSKLQGQDLLSYKVFKGEREA 131

Query: 125 EVDLYKYKDYYLPITAESGFHAYISSIAQGR----FNTQEDYQNYLDKLKALPNYFAQQT 180
           E++  K+ D+  PI        +I+ +  G     F T +DY+N+L +L+          
Sbjct: 132 EIEGAKFPDHLQPIQQFYNPFNFIAMLGSGNSAQPFKTVKDYENWLSRLEQTAGGVDVII 191

Query: 181 YWLKQGLKEGITPPKATLKGFENSISAYILP-VEKSSYFKPFTQYPNHFTEAQKAQLTQQ 239
             +++G+++ +  PKA +      + A+I+  VE S ++ P    P  F+E  + +LTQ+
Sbjct: 192 GNMREGIEQDVVQPKALMVKVLPQLKAHIVDDVETSLFYGPIKNMPESFSEEDRKRLTQE 251

Query: 240 GRALVEQNVIPTYQAFYDFMTQEYMPNTRDNIAANSLPNGDAFYENRVRYYTTLDITSAE 299
               ++  V+PTYQ  +DF+ QEY+P  R+     +LPNG  +Y  +V+  T+ D+T  +
Sbjct: 252 YVKAIKGWVVPTYQKMHDFIEQEYIPAARETSGMVALPNGKEWYAFKVKETTSTDLTPEQ 311

Query: 300 VHELGLKEVKRIRQEMEQVIKSVGFKGSFADFLYFLRTDPQFYATSADQLLKEAAFIAKK 359
           +H++GL EV R++ EM+ V+K VGF+G+  +F  F +TDPQF   + + +L+    +  K
Sbjct: 312 IHQIGLDEVARLQNEMKGVMKEVGFEGTLQEFFEFTKTDPQFQFDTKEDMLQAYENLRGK 371

Query: 360 ADATLPKYFGKLPRKPYGIAPVPAEIAPKYTSGRYSGSNRD-DEPGYYWVNTYALDKRPL 418
            D T P  F  +P+  + I  V        ++  Y   + D   PG ++VNTY L  RP 
Sbjct: 372 LDKTAPDLFKVIPKAEFEIRAVEPYREQSSSAASYQSPSPDGSRPGIFYVNTYDLSARPT 431

Query: 419 YELEALTLHEAVPGHHLQISLNSELSSQPDFRRYSYISAFGEGWGLYSEYLGLEAGFYQD 478
           + +E+L LHEAVPGHH Q S   EL   P+FRR+   +A+ EGWGLYSE LG E G Y D
Sbjct: 432 WTVESLYLHEAVPGHHFQRSTQIELKDVPNFRRFGGTTAYTEGWGLYSESLGKEMGVYTD 491

Query: 479 PYSNFGRLTYEMWRAARLVVDTGMHAQGWSREQAIEFMANNTALSLHNVTTEIDRYITWP 538
           PY  FG L+ E+WRA RLV DTG+HA+GWSRE+ + +M  N+  +   + +E +R++  P
Sbjct: 492 PYQYFGALSAELWRAIRLVTDTGLHAKGWSREKVLAYMEANSPAAEARMVSEAERFMAIP 551

Query: 539 GQALSYKIGELTIKRLRAKAEQALGDKFDIRAFHDAVLENGSVPMSVLEQQINDFIEAKK 598
            QAL+YKIG+L I+ LR  AE  LGDKFDIR FH  VL++G++P+++LE +IN +IE +K
Sbjct: 552 SQALAYKIGQLKIRELRTLAENELGDKFDIREFHHEVLKDGAIPLNILEDKINRWIEEQK 611