Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 598 a.a., Uncharacterized protein conserved in bacteria from Kangiella aquimarina DSM 16071

 Score =  645 bits (1664), Expect = 0.0
 Identities = 317/559 (56%), Positives = 404/559 (72%), Gaps = 3/559 (0%)

Query: 46  LQAIVDQSWQLQLSASPEMAYGMGDKSAAGKLQDLSPEALAKLNQGQIAILVQLKALDRS 105
           L    D+  +  L  +P  A   GD+SA GKL+D+SPEA          ++ +LK++ R 
Sbjct: 34  LHEFFDKVEEYNLKQNPMWAASRGDESAKGKLRDVSPEAYQARKVELEKLIKELKSIQRD 93

Query: 106 KLSKEDKINAQILEDQLQNEVDLYKYKDYYLPITAESGFHAYISSIAQG-RFNTQEDYQN 164
            LS ED+I+  +++ QLQ +V    +K Y +P+ +E GFH   + +AQ     T EDY+N
Sbjct: 94  DLSAEDQISYDMMQSQLQQQVAEIDFKTYEMPLNSEWGFHVEAAGLAQRVSLRTYEDYEN 153

Query: 165 YLDKLKALPNYFAQQTYWLKQGLKEGITPPKATLKGFENSISAYILP-VEKSSYFKPFTQ 223
           YL  L  +P +F Q    +K G   G + PKA L+G+ + I AYI      +++F PF  
Sbjct: 154 YLTLLTQIPGFFQQNISNMKAGQARGFSVPKAVLEGYSDGIKAYIKDNAIDTAWFAPFNN 213

Query: 224 YPNHFTEAQKAQLTQQGRALVEQNVIPTYQAFYDFMTQEYMPNTRDNIAANSLPNGDAFY 283
           +P HFTE QK +L +Q + ++ Q V+P YQ +  F  +EY PN ++ IAA   P G A+Y
Sbjct: 214 FPKHFTEKQKNELVKQAKTIIGQVVVPEYQNYLKFFEEEYYPNAKETIAAYDFPEGKAYY 273

Query: 284 ENRVRYYTTLDITSAEVHELGLKEVKRIRQEMEQVIKSVGFKGSFADFLYFLRTDPQFYA 343
           +N+++ YTTLD++  E+HE+GL EVKRIR EMEQVIK  GF+GSFA+FL FLRTDPQFYA
Sbjct: 274 QNQLKLYTTLDMSPDEIHEIGLSEVKRIRAEMEQVIKDSGFEGSFAEFLEFLRTDPQFYA 333

Query: 344 TSADQLLKEAAFIAKKADATLPKYFGKLPRKPYGIAPVPAEIAPKYTSGRYSGSNRDD-E 402
            + ++L+KEA++I+K+ D  LP++FGKLPR+PYG+ PVP  IAPKYT+GRYSG+  D   
Sbjct: 334 KTPEELIKEASYISKRMDHKLPQFFGKLPRQPYGVVPVPEAIAPKYTTGRYSGAPLDSTR 393

Query: 403 PGYYWVNTYALDKRPLYELEALTLHEAVPGHHLQISLNSELSSQPDFRRYSYISAFGEGW 462
            G YWVNTYALDKRPLY LEALTLHEAVPGHHLQ +L  EL   P+FR+ +YISAFGEGW
Sbjct: 394 AGEYWVNTYALDKRPLYNLEALTLHEAVPGHHLQTALAKELEHLPNFRQNTYISAFGEGW 453

Query: 463 GLYSEYLGLEAGFYQDPYSNFGRLTYEMWRAARLVVDTGMHAQGWSREQAIEFMANNTAL 522
           GLYSE LGLEAGFYQDPYSNFGRLTYEMWRA RLVVDTGMH +GW+R+QAI+ M  NTAL
Sbjct: 454 GLYSEKLGLEAGFYQDPYSNFGRLTYEMWRAIRLVVDTGMHTKGWTRDQAIKMMEENTAL 513

Query: 523 SLHNVTTEIDRYITWPGQALSYKIGELTIKRLRAKAEQALGDKFDIRAFHDAVLENGSVP 582
           S HNV TEIDRYI+WP QALSYK+GEL I  LRAKAE+ LG  FDIR FHDA+L NGS+P
Sbjct: 514 STHNVRTEIDRYISWPAQALSYKLGELKILELRAKAEKELGQDFDIRKFHDAILANGSIP 573

Query: 583 MSVLEQQINDFIEAKKAAI 601
           +SVLE QI  FIEA+KA++
Sbjct: 574 LSVLEDQIEQFIEAEKASV 592