Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 637 a.a., Uncharacterized protein conserved in bacteria from Kangiella aquimarina DSM 16071

 Score =  261 bits (668), Expect = 5e-74
 Identities = 195/638 (30%), Positives = 306/638 (47%), Gaps = 55/638 (8%)

Query: 1   MHKLFTPSLLICVLSACSTAKPPAESASQ----TAVAITQSSVKTMAPALQAIVDQSWQL 56
           M  L   + L+ V   C   +   E A+Q    TAV+  Q+  ++ A   + + D+    
Sbjct: 12  MASLLVSAALLSV--GCQQEEEQQEQANQQQVNTAVSKEQAHKQSEASP-EMLFDKITTT 68

Query: 57  QLSASPEMA--YGMGDKSAAG----KLQDLSPEALAKLNQGQIAILVQLKALDRSKLSKE 110
             +A P  A  YG+  + A G    KL D SP A   L Q       QL  L      K 
Sbjct: 69  LFAARPMDATMYGVSQEVAGGYYQDKLPDYSPAAEKALRQSLRHYADQLADL------KS 122

Query: 111 DKINAQILEDQLQNEVDLYKY----KDYYLP-ITAESGFHAYISSIAQGR---------- 155
           D I     E+  +  +DL  Y    K + +  I    G   +I S   G           
Sbjct: 123 DTIQG---EENRKVVIDLAHYYSGEKQFDIGFIDGWMGHSPFIVSQINGPAIDVPNLLQN 179

Query: 156 ---FNTQEDYQNYLDKLKALPNYFAQQTYWLKQGLKEGITPPKATLKGFENSISAYILPV 212
                 +++ ++Y+ +++   +        +    ++G  PPK  + G  N ++ ++   
Sbjct: 180 NHPIKNEQNAKDYIARMEQFGDMIESVKSKVLADAEKGWIPPKVIINGALNFLNGFVAAE 239

Query: 213 EKSSYFKPFTQYPNHFTEA-----QKAQLTQQGRALVEQNVIPTYQAFYDFMTQEYMPNT 267
            +       T   N   +      QK ++     ++ +  + P Y+     M +  +   
Sbjct: 240 PEKHAL--VTNLQNKLDKLDIPAEQKEKMMFDAVSITKTTIYPAYKNLAMVM-EGLLEKA 296

Query: 268 RDNIAANSLPNGDAFYENRVRYYTTLDITSAEVHELGLKEVKRIRQEMEQVIKSVGF-KG 326
            +     + PNG  FY   V      ++T  EVH++GL EV+RI  EM+ ++ S G+ +G
Sbjct: 297 SEESGIWAQPNGSEFYRYAVSELGDTELTPEEVHQIGLDEVERISAEMDAILISEGYDQG 356

Query: 327 SFADFLYFLRTDPQFYATSADQ----LLKEAAFIAKKADATLPKYFGKLPRKPYGIAPVP 382
           +  + +  L  + +F    +D+    LL +   +    +  +P  F  +P     I  +P
Sbjct: 357 TVGERMAALNDEDRFIYEDSDEGRQKLLDDLNGMLADINELMPTRFATIPPYDVEIRRIP 416

Query: 383 AEIAPKYTSGRYSGSNRD-DEPGYYWVNTYALDKRPLYELEALTLHEAVPGHHLQISLNS 441
            E       G+Y+    D  EPG YW+N   +   P ++L+ LT HEA PGHH QI+LN 
Sbjct: 417 VERQDGAPGGQYTPPPLDGSEPGIYWINLKDMKANPKFDLKTLTYHEANPGHHWQIALNM 476

Query: 442 ELSSQPDFRRYSYISAFGEGWGLYSEYLGLEAGFYQD-PYSNFGRLTYEMWRAARLVVDT 500
              S P  RR +  +A+ EGW LYSE +  E G Y+D PY + GRL  E++RA RLVVDT
Sbjct: 477 AQESLPLIRRIAPYNAYVEGWALYSELVAWEMGMYKDDPYGDLGRLKAELFRAVRLVVDT 536

Query: 501 GMHAQGWSREQAIEFMANNTALSLHNVTTEIDRYITWPGQALSYKIGELTIKRLRAKAEQ 560
           G+H + W+REQAI++MA  T  +  +V +EI+RY+ WPGQAL YK+G L I   R +A++
Sbjct: 537 GLHHKKWTREQAIQYMAEKTGTAQSSVVSEIERYMVWPGQALGYKLGMLNIVEQRERAKE 596

Query: 561 ALGDKFDIRAFHDAVLENGSVPMSVLEQQINDFIEAKK 598
            LG+ FDI+ FHD VL  G+VPMSVL  +I+ +IE+ K
Sbjct: 597 ELGEAFDIKEFHDLVLLGGAVPMSVLNDKIDAWIESNK 634