Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 611 a.a., DUF885 domain-containing protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  318 bits (815), Expect = 4e-91
 Identities = 204/610 (33%), Positives = 319/610 (52%), Gaps = 27/610 (4%)

Query: 4   LFTPSLLICVLSACSTAKPPAESASQTAVAITQSSVKTMAPALQAIVDQSWQLQLSASPE 63
           L + + ++ VLSA       A + +QT+     ++ ++    L A  +Q++Q +++ SP+
Sbjct: 5   LISSAAMMAVLSA-------APALAQTSAPAQTAAAESEDARLNAFFEQAFQARIALSPQ 57

Query: 64  MAYGMGDKSAAGKLQDLSPEALAKLNQGQIAILVQLKA-LDRSKLSKEDKINAQILEDQL 122
               +G K+   KL D+S  A  +    Q A L Q+KA  D  KL  +  ++ ++ E  +
Sbjct: 58  QMTSLGIKTDYDKLDDVSDAAADRALALQEAQLAQMKAQFDPQKLGPQAALSWRMFEYGV 117

Query: 123 QNEVDLYKYKDYYLPITAESG--FHAYISSIAQGRFNTQEDYQNYLDKLKALPNYFAQQT 180
           Q      +++D+     A         +  I   R ++  D + Y+ ++KA      Q  
Sbjct: 118 QQARLSNQWRDWGFQFAANGNPTTSLPVFLINNHRVSSVADAEAYVARIKAAETQMDQVA 177

Query: 181 YWLKQGLKEGITPPK----ATLKGFENSISAYILPVEKSSYFKPFTQYPNHFTEAQKAQL 236
             L+Q    G+  P+     ++    N I+    P +  +    +  +     EA +   
Sbjct: 178 DELRQRAAAGVVSPRFVFAPSIANTRNVITG--APFDDGADNPVWADFTKK-VEALETDP 234

Query: 237 TQQGRALVEQNVIPT--YQAFYDFMTQ---EYMPNTRDNIAANSLPNGDAFYENRVRYYT 291
             + R L E     T  Y+A ++ +     E  P    +     LP G+A+Y  R++  T
Sbjct: 235 ATKDRLLSEARAALTGPYKAGFETVLTALAEVQPKADSDAGVWRLPQGEAYYNARLQLST 294

Query: 292 TLDITSAEVHELGLKEVKRIRQEMEQVIKSVGFKGSFADFLYFLRTDPQFYATSA----D 347
           T D+T+ ++H++GL EV RI+ EME +   VGF GS   F  FL+TDP+F   +     +
Sbjct: 295 TTDLTADQIHQIGLAEVARIQAEMETIKTQVGFTGSLQAFFTFLKTDPRFQYPNTPEGKE 354

Query: 348 QLLKEAAFIAKKADATLPKYFGKLPRKPYGIAPV-PAEIAPKYTSGRYSGSNRDDEPGYY 406
           Q L +A     +  A  P++F  LP+    +  V P   A    +   S +     PG Y
Sbjct: 355 QYLTDARGFIAQVMAAAPQWFSTLPKAALEVRAVEPFREATASIAFYNSPAPDGSRPGIY 414

Query: 407 WVNTYALDKRPLYELEALTLHEAVPGHHLQISLNSELSSQPDFRRYSYISAFGEGWGLYS 466
           +VN   + +    ++E ++ HE  PGHH QI+   E+   P FRR+    A+ EGWGLY+
Sbjct: 415 YVNLSDMTQVLKPQIEGISYHEGAPGHHFQIAYAQEIEGLPRFRRFGGYGAYAEGWGLYA 474

Query: 467 EYLGLEAGFYQDPYSNFGRLTYEMWRAARLVVDTGMHAQGWSREQAIEFMANNTALSLHN 526
           E LG E  FYQDPYS+FGRL+ E+WRA RLV DTG+HA+ WSREQA+++   N+ LS  +
Sbjct: 475 EQLGKEMAFYQDPYSDFGRLSTELWRAVRLVTDTGLHAKRWSREQAMDYFRQNSLLSERD 534

Query: 527 VTTEIDRYITWPGQALSYKIGELTIKRLRAKAEQALGDKFDIRAFHDAVLENGSVPMSVL 586
           +  E++RYIT PGQA SYKIGEL I+ LR +A   LGD+FDI+ FH  VL +GSVP+ VL
Sbjct: 535 IEKEVERYITNPGQATSYKIGELKIEELRDRARTDLGDRFDIKDFHAVVLGSGSVPLDVL 594

Query: 587 EQQINDFIEA 596
           E Q++ +I A
Sbjct: 595 EDQVDGWIAA 604