Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 610 a.a., DUF885 family protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  256 bits (654), Expect = 2e-72
 Identities = 188/575 (32%), Positives = 270/575 (46%), Gaps = 28/575 (4%)

Query: 43  APALQAIVDQSWQLQLSASPEMA--YGMGDKSAAGKLQDLSPEALAKLNQGQIAILVQLK 100
           A  L+  +D +++  L  SPE+   +G+     A     L+    A+ +  +     Q  
Sbjct: 37  AAQLKTFMDATFEQTLDKSPEVVTMFGLDKGDRAAAKSKLTVPTRAEEDDQRAFTRRQRA 96

Query: 101 ALDRSKLSKEDKINAQILEDQLQN------EVDL-YKYKDYYLPITAESGFHAYISS--- 150
            L R   SK D  NA   +   QN        D+ Y    +  P        AY S+   
Sbjct: 97  ELSRIDRSKLDARNANYYDSLTQNLDGVIATYDIPYGQGGWPNPYRVSQQGGAYQSTPDF 156

Query: 151 -IAQGRFNTQEDYQNYLDKLKALPNYFAQQTYWLKQGLKEGITPPKATL-KGFENSISAY 208
              Q    T  D   Y+ ++ A  +    +T  LK+    G+ PP   L K         
Sbjct: 157 LANQHTIETAADADAYVARVNAFADVLMAETDRLKEDYALGVIPPDFILAKAIRQQDGVL 216

Query: 209 ILPVEKSSYFKPFTQYPNHFTEAQ--KAQLTQQGRALVEQNVIPTYQAFYDFMTQEYMPN 266
             P   S    P TQ       A+        Q   LV + V P   A  + + +   PN
Sbjct: 217 ATPAATS----PLTQSVVDRGRAKGLTGDWGAQVERLVTERVYPALAA-QNAVLKAAQPN 271

Query: 267 TRDNIAANSLPNGDAFYENRVRYYTTLDITSAEVHELGLKEVKRIRQEMEQVIKSVGF-K 325
                +   LP G+ +Y N +RY TT  +T+ E+H  G++++  +    + ++K+ G  +
Sbjct: 272 AVHEASVRRLPQGEQYYANSLRYITTTRLTADEIHRTGVEQMADLTARADVLLKAQGLTQ 331

Query: 326 GSFADFLYFLRTDPQFYATSADQLLKE--AAFIAKKAD--ATLPKYFGKLPRKPYGIAPV 381
           GS A+ +  L  DP++   + D    E  A   A+ AD  A LP  FG+LP+    I  V
Sbjct: 332 GSVAERIKALGDDPKYVYANTDAGKAELIAKLNAQMADMQARLPNAFGRLPKAKVEIKRV 391

Query: 382 PAEIAPKYTSGRYSGSNRDD-EPGYYWVNTYALDKRPLYELEALTLHEAVPGHHLQISLN 440
           P EI      G Y+  + D   PG YW+N     + P + L  LT HEA PGHHLQISL 
Sbjct: 392 PPEIEAGAPMGYYNSPSLDGTRPGIYWINLKDTAEWPSWTLPTLTYHEATPGHHLQISLQ 451

Query: 441 SELSSQPDFRRYSYISAFGEGWGLYSEYLGLEAGFYQ-DPYSNFGRLTYEMWRAARLVVD 499
            E  S P        S++ EGWGLY+E L  E G Y+ DP    G L   M+RAARLVVD
Sbjct: 452 QESESAPLLMNLLGFSSYVEGWGLYAEQLADELGAYESDPVGQIGYLQSLMFRAARLVVD 511

Query: 500 TGMHAQGWSREQAIEFMANNTALSLHNVTTEIDRYITWPGQALSYKIGELTIKRLRAKAE 559
           TG+H++GWSRE+ I +M           T+E++RY  WPGQA +YK+G     RLR KA+
Sbjct: 512 TGIHSKGWSREEGIRYMMEAYGDQEGAATSEVERYCGWPGQACAYKVGHNEWVRLREKAK 571

Query: 560 QALGDKFDIRAFHDAVLENGSVPMSVLEQQINDFI 594
             LG +FDI+ FHD  L  G VP+SVLE+ ++ ++
Sbjct: 572 TTLGPRFDIKGFHDTALAAGGVPLSVLERIVDGWV 606