Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 595 a.a., DUF885 domain-containing protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  430 bits (1105), Expect = e-124
 Identities = 237/592 (40%), Positives = 344/592 (58%), Gaps = 6/592 (1%)

Query: 14  LSACSTAKPPAESASQTAVAITQSSVKTMAPA---LQAIVDQSWQLQLSASPEMAYGMGD 70
           +S  + A   A  +   AVA T  +    APA   L A++        S  P  A G GD
Sbjct: 3   ISYLAVAAMLAAGSPVAAVAQTPPAAVATAPADAALNAVIADYETYLKSVDPISAGGEGD 62

Query: 71  KSAAGKLQDLSPEALAKLNQGQIAILVQLKALDRSKLSKEDKINAQILEDQLQNEVDLYK 130
             A G++ DLS E            + +L A+D + LS    IN   L   L   ++   
Sbjct: 63  VEAMGRVPDLSREFELAQRAPLQGFVRRLAAIDPASLSHGGGINHAFLLYTLNRSLEGLD 122

Query: 131 YKDYYLPITAESGFHAYISSIAQG-RFNTQEDYQNYLDKLKALPNYFAQQTYWLKQGLKE 189
           Y    L   +E G   +   +    R N+  + + Y+ +++     +AQ T   ++GL  
Sbjct: 123 YDTSRLAFDSEGGPGTWALYVGGSTRLNSVAEAEAYIKRIRGFGQIYAQTTANARRGLDT 182

Query: 190 GITPPKA-TLKGFENSISAYILPVEKSSYFKPFTQYPNHFTEAQKAQLTQQGRALVEQNV 248
           G+   ++ T      + +   +  +     KP    P+  ++A K +L+ +  A V + +
Sbjct: 183 GLVQARSVTESALTLARNDVAIKPDAEPLLKPLATLPSTVSQADKDRLSAEATAAVSEAI 242

Query: 249 IPTYQAFYDFMTQEYMPNTRDNIAANSLPNGDAFYENRVRYYTTLDITSAEVHELGLKEV 308
           +P  +A+ +F+  +Y+P         + P G   Y   VR +TT D+T  ++H++GL EV
Sbjct: 243 LPARRAWLEFLESDYLPKAPVQPGIGNRPGGKELYAYLVRGHTTTDLTPDQIHQIGLDEV 302

Query: 309 KRIRQEMEQVIKSVGFKGSFADFLYFLRTDPQFYATSADQLLKEAAFIAKKADATLPKYF 368
            RIR  M+  +K+ G+ G FA FL FLRTDPQFYATS + LL++A+ +AK+AD  LP  F
Sbjct: 303 ARIRARMDVEMKASGWTGDFAGFLNFLRTDPQFYATSREALLQQASEMAKRADGGLPPLF 362

Query: 369 GKLPRKPYGIAPVPAEIAPKYTSGRYSG-SNRDDEPGYYWVNTYALDKRPLYELEALTLH 427
             LPR  Y + PVP +I   YT+GRY+G S ++    +Y VNT  LD+RPLYEL ALTLH
Sbjct: 363 ATLPRLTYDVQPVPPQIEENYTTGRYNGGSMQNGVSAHYIVNTSKLDQRPLYELPALTLH 422

Query: 428 EAVPGHHLQISLNSELSSQPDFRRYSYISAFGEGWGLYSEYLGLEAGFYQDPYSNFGRLT 487
           EAVPGHHLQI L  E   QP FRR + +SA+ EGWGLY+EYLG E GFY+ PY  FGRL+
Sbjct: 423 EAVPGHHLQIGLQQEAPGQPYFRRQANVSAYTEGWGLYAEYLGEEMGFYRTPYERFGRLS 482

Query: 488 YEMWRAARLVVDTGMHAQGWSREQAIEFMANNTALSLHNVTTEIDRYITWPGQALSYKIG 547
           YEMWRA RLV DTG+H  GW+ EQA     +N+AL+ HN+ TE+ RYI WPGQA +YKIG
Sbjct: 483 YEMWRACRLVADTGLHWMGWTEEQARACFRDNSALAPHNIETELQRYIGWPGQATAYKIG 542

Query: 548 ELTIKRLRAKAEQALGDKFDIRAFHDAVLENGSVPMSVLEQQINDFIEAKKA 599
           E+ ++ +RA+AE+ LG KF++R FHDA+L  G +P+++L+Q+++ +I  +KA
Sbjct: 543 EIRLREIRARAERELGSKFNVRTFHDALLVEGPLPLALLDQRMDAWIAEQKA 594