Pairwise Alignments

Query, 235 a.a., ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 272 a.a., sulfate ABC transporter permease from Pseudomonas simiae WCS417

 Score = 76.6 bits (187), Expect = 4e-19
 Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 15/218 (6%)

Query: 21  PDVWSIISVSFSVSFAALLITLVPSMVLGFVLAFAHFPGKWFVTNLVQTLQSIPTVVIGL 80
           P V + + +SFS +  A LI  V   +L +VL    FPG+  +  ++    ++PT V G+
Sbjct: 53  PRVLAALQLSFSTALYAALINGVIGTLLAWVLVRYTFPGRKIIDAMIDLPFALPTAVAGI 112

Query: 81  LVYLILTRNGPLGD------LKWLFTQEGMILGQMLICAPVMIAMSQAAFTSVDRRAWET 134
            +  + T NG +G        K  +T  G+ L    +  P ++   Q     + R   E 
Sbjct: 113 ALTALYTPNGLVGQFAADLGFKIAYTPLGITLALTFVTLPFVVRTVQPVLADIPREVEEA 172

Query: 135 SRTLGASWAGAVWAVCRELRMPLLL-----AIVAAFSRILTEVGCSMMVGGNILNVTRNI 189
           +  LGA        V R + +P LL         AF+R + E G  + + GN+   T  +
Sbjct: 173 AACLGAK----PLQVFRHILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEIL 228

Query: 190 PTAIALETSKGDFAQAIALGLVLLILALILNFALGSLR 227
           P  I ++  + D+  A ++G+++L+++ +L   +  L+
Sbjct: 229 PLLIMVKLDQYDYRGATSIGVLMLVVSFVLLLLINLLQ 266