Pairwise Alignments

Query, 235 a.a., ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 301 a.a., Sulfate transport system permease protein CysT from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 82.4 bits (202), Expect = 9e-21
 Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 19/236 (8%)

Query: 17  FSLD-PDVWSIISV-----SFSVSFAALLITLVPSMVLGFVLAFA----HFPGKWFVTNL 66
           FSL  P  W  ++      S+ ++F A LI    + V G ++A+      FPGK  V  L
Sbjct: 62  FSLTWPQFWEAVTAPRVLASYKLTFGASLIAATVNAVFGLLVAWVLVRYSFPGKKIVDAL 121

Query: 67  VQTLQSIPTVVIGLLVYLILTRNG-------PLGDLKWLFTQEGMILGQMLICAPVMIAM 119
           V    ++PT V G+ +  IL  NG       PLG L+  F   G+++  + I  P ++  
Sbjct: 122 VDLPFALPTAVAGISLTAILAGNGWIGQYTEPLG-LQLAFNPNGVVIALIFIGLPFVVRT 180

Query: 120 SQAAFTSVDRRAWETSRTLGAS-WAGAVWAVCRELRMPLLLAIVAAFSRILTEVGCSMMV 178
            Q      ++   E +  LGA+ W      +   +   LL     AF+R + E G  + +
Sbjct: 181 VQPVLEDSEKELEEAATCLGATRWQTFSRVIFPSIAPALLTGFAMAFARAVGEYGSVIFI 240

Query: 179 GGNILNVTRNIPTAIALETSKGDFAQAIALGLVLLILALILNFALGSLRGKETPRS 234
            GN+  V+   P  I  +  + D+A A A+ LV+L+ + +L   +  L+  +  RS
Sbjct: 241 AGNMPMVSEITPLIIISKLEQYDYAGATAVALVMLLFSFVLLLLINGLQTWQRKRS 296