Pairwise Alignments

Query, 235 a.a., ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 277 a.a., sulfate/thiosulfate ABC transporter permease from Escherichia coli BL21

 Score = 76.3 bits (186), Expect = 6e-19
 Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 7/217 (3%)

Query: 20  DPDVWSIISVSFSVSFAALLITLVPSMVLGFVLAFAHFPGKWFVTNLVQTLQSIPTVVIG 79
           +P V +   V+   +F A +   V  +++ ++L    FPG+  +  L+    ++PT V G
Sbjct: 53  NPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAG 112

Query: 80  LLVYLILTRNGPLG------DLKWLFTQEGMILGQMLICAPVMIAMSQAAFTSVDRRAWE 133
           L +  + + NG  G      D+K  +T  G+ +       P ++   Q     +     E
Sbjct: 113 LTLASLFSVNGFYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEE 172

Query: 134 TSRTLGAS-WAGAVWAVCRELRMPLLLAIVAAFSRILTEVGCSMMVGGNILNVTRNIPTA 192
            + TLGA+ W      V  EL   L+  +  +F+R L E G  + + GNI   T      
Sbjct: 173 AAETLGATRWQSFCKVVLPELSPALVAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLM 232

Query: 193 IALETSKGDFAQAIALGLVLLILALILNFALGSLRGK 229
           I +   + D+  A A+  V+L  +LIL F++ +L+ +
Sbjct: 233 IFVRLQEFDYPAASAIASVILAASLILLFSINTLQSR 269