Pairwise Alignments

Query, 709 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 869 a.a., cell cycle histidine kinase CckA from Rhizobium sp. OAE497

 Score =  124 bits (311), Expect = 2e-32
 Identities = 93/309 (30%), Positives = 153/309 (49%), Gaps = 22/309 (7%)

Query: 394 DRDNELSNLAEQFDRMLDL----LQRRNAQIQAAAEQLEMKVEERTRSLQDKTLELQRNV 449
           DR+   S LA   DR  D+     +  N + +     +   +++   + ++  +     V
Sbjct: 402 DRERLQSALAAAKDRQGDIPPIDSRTPNDEARHFRFYVNAVIDQSDEAPEEAAIVYAVEV 461

Query: 450 ALLNETRQQLVTNEKLTALGELTAGIAHEINNP-TAVILGNMELLRYELGDKAEVVKEEI 508
                   Q+   +K+ A+G L  GIAH+ NN  TA++L +  LL       A     ++
Sbjct: 462 TEQKALEAQMAQTQKMNAVGTLAGGIAHDFNNVLTAILLSSDHLLLQARSSDASFA--DL 519

Query: 509 DLVIQQVGRISTIIRSLLQYSRPGEFNAPLEMHPITPIIEEMLVLVRHSIQKQEVVLITE 568
             + +   R + ++R LL +SR         +  +T ++ ++ +LV   +    V L  E
Sbjct: 520 MEIKRNANRAAVLVRQLLAFSRKQTMRP--SVLNLTDVVGDLRMLVDRLLSGTHVKLDVE 577

Query: 569 LNASC-PVQVNRPQLLQVLINLVVNAAHAMDGKGRIWVRTYDWVQQDIAIG--------- 618
                 PV+ +  Q  QVLINL VNA  AM   G++ VRT +   Q++A           
Sbjct: 578 YGRDLWPVKTDLSQFEQVLINLCVNARDAMPEGGKLTVRTRNVTAQEVAAFNYSYMPAED 637

Query: 619 -VKIEVEDEGSGIEPEQLGRIFDPFYTTRK--DGTGLGLSLSYGIIKRIGGTIEVSSVLG 675
            V +EV D G+GI PE + +IF+PF+TT++   GTGLGL++ YGI+K+ GG I+  S +G
Sbjct: 638 MVLVEVADTGTGIAPEIMDKIFEPFFTTKEVGKGTGLGLAMVYGIVKQSGGYIQPESEVG 697

Query: 676 KGSIFTIGL 684
           KG+ F + L
Sbjct: 698 KGTTFRVFL 706