Pairwise Alignments

Query, 709 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 467 a.a., putative sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  141 bits (356), Expect = 6e-38
 Identities = 105/325 (32%), Positives = 163/325 (50%), Gaps = 49/325 (15%)

Query: 398 ELSNLAEQFDRMLDLLQRRNAQIQAAAEQLEMKVEERTRSLQDKTLELQRNVALLNETRQ 457
           E+  +A       ++ QR + ++     QLE +VE RT+ L   +  LQ+ +    +   
Sbjct: 146 EVQQMASTLLTKWEMTQRASLKMH----QLEQRVERRTQQLTQASEALQQEIEERKQLES 201

Query: 458 QLVTNEKLTALGELTAGIAHEINNPTAVILGNM--------------------------- 490
           QLV +EKL +LG++ AG+AHEINNP   +  N+                           
Sbjct: 202 QLVQSEKLASLGQMAAGVAHEINNPIGFVSSNLGTLGGYFQQLVAMLDAYREAELMLGAN 261

Query: 491 ----ELLRYELGDKAEVVKEEIDLVIQQ----VGRISTIIRSLLQYSRPGEFNAPLEMHP 542
                L R     + E + E+I ++I++    +GR++ I++ L  +SR        ++  
Sbjct: 262 ETTGRLQRLREQTELEFLMEDIPILIKESKDGIGRVAHIVKDLKDFSRVDSAQQ-WQLAD 320

Query: 543 ITPIIEEMLVLVRHSIQKQEVVLITELNASCPVQVNRPQLLQVLINLVVNAAHAMDG-KG 601
           +   I+  L +V   + K +  L+       PV+    Q+ QV++NLV+NAA AM   +G
Sbjct: 321 LQQGIDSTLNIVASEL-KHKADLVKRYQPLPPVECLPSQINQVIMNLVLNAAQAMGPERG 379

Query: 602 RIWVRTYDWVQQDIAIGVKIEVEDEGSGIEPEQLGRIFDPFYTTRK--DGTGLGLSLSYG 659
            I + T           V IEV D G+GI PE + +IFDPF+TT+    GTGLGLSLSYG
Sbjct: 380 TITLGTAHQ-----GAWVCIEVADTGAGIAPENIKKIFDPFFTTKPVGQGTGLGLSLSYG 434

Query: 660 IIKRIGGTIEVSSVLGKGSIFTIGL 684
           I+K+ GG I VSS +G G+ F + L
Sbjct: 435 IVKKHGGEITVSSQVGVGTTFRVQL 459