Pairwise Alignments

Query, 709 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 703 a.a., Signal transduction histidine kinase from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  404 bits (1038), Expect = e-117
 Identities = 256/698 (36%), Positives = 392/698 (56%), Gaps = 46/698 (6%)

Query: 15  MQAKVRYRILILTLLPILLTLVSLVFITIYW-NISYTGKQLFMKVKADLAVAENTLQQVQ 73
           +   VR ++L + LLP+LL    LV     W N++Y  + L  KV++DLAVA     QV 
Sbjct: 10  LAGSVRNKLLAMALLPLLLAFPMLVLALALWGNVAYD-RLLITKVRSDLAVAHGYFDQVL 68

Query: 74  VRQEKQLERVMTSWTFQNDFRPILSGALAHRASIDTFLHEQKKQLDLDFLRLVS------ 127
                    V  S       RP  +     R +++  L   +++L LDFL L +      
Sbjct: 69  SEVGSGTLGVAGSQALYTALRP--ATPTDRRDAVNEQLALARERLGLDFLLLYTPQGQPL 126

Query: 128 -------VAEAAADPDLRQILPKIGGMLPYSG-------LMVLSRERLARIDPDLAQRAS 173
                  +++A A+  +  + P +GG +  +        L+VL  E L  + P L+ R  
Sbjct: 127 ARAVPAGLSQADANAPIPLMPPALGGSMNENSRAIARARLLVLEPEALEALAPHLSPRLR 186

Query: 174 IPLLATLRAQSPDKQVEERGLLSRSLLPIPDSEGKVAWYLDGGVLFNRDTRIVDHIRDLV 233
           IPL+AT  A    ++ E R ++  S  P+ D+ G+    L GG+L N++   +DHI  +V
Sbjct: 187 IPLVATRNAAPATRETEHRAMVMLSTHPVRDAAGQTIALLAGGLLLNQNLDFIDHINRIV 246

Query: 234 YDKGTLPERSIGTVTIFLDNIRVSTNVPLHFFPQPNESQGRALGSLVSEEVREKVLNHGE 293
           Y +G+LP  S GT T+F+D++R++TNV L           RA+G+ VS+ VR+ VL  G 
Sbjct: 247 YPEGSLPFGSQGTATLFMDDVRITTNVRLF-------QDQRAIGTRVSQTVRDAVLGQGL 299

Query: 294 LWVDRAFVYNDWFISAYAPLEDIRGQRVGMIYTGFSESPF--IHNYLLNIIELGTILMLV 351
            W+DRAFV NDW++SAY PL D   QR+GM+Y G+ E+PF  +   +L +  +G I + V
Sbjct: 300 TWLDRAFVVNDWYVSAYEPLLDAHDQRIGMLYVGYLEAPFRLVRYAMLGV--MGLIFLGV 357

Query: 352 LLISGLLVYRGAYSLLQPIERIHHVVQAVQSGRN-VRIGALGLDRDNELSNLAEQFDRML 410
           + +S     R A S+ QP++R++  +Q V+ G++  R+G +   RD EL  LA   D +L
Sbjct: 358 MALSAWFSLRWARSIFQPVQRMNRTMQLVEEGQSGARVGEISA-RD-ELGALAGHLDELL 415

Query: 411 DLLQRRNAQIQAAAEQLEMKVEERTRSLQDKTLELQRNVALLNETRQQLVTNEKLTALGE 470
           D++  + A +Q   E+L+ KV ERT        EL+ + A L   +QQLV +EKL A+G+
Sbjct: 416 DVIDDKTAALQRWGEELDHKVAERTA-------ELEASNASLQVAQQQLVKSEKLAAIGQ 468

Query: 471 LTAGIAHEINNPTAVILGNMELLRYELGDKAEVVKEEIDLVIQQVGRISTIIRSLLQYSR 530
           LTA IAHEINNP AV+ GN++L+R  LG  +  V  E+ L+ +QV R+  I+  LLQY+R
Sbjct: 469 LTASIAHEINNPIAVMQGNLDLMRETLGAASRPVASELKLLDEQVERMRIIVTQLLQYAR 528

Query: 531 PGEFNAPLEMHPITPIIEEMLVLVRHSIQKQEVVLITELNASCPVQVNRPQLLQVLINLV 590
           P E+   +E   I   +E+ LVLV H + +  + +  +L A+     NR +L QV+INL+
Sbjct: 529 PTEYAGYVETLDINRTMEDCLVLVGHLLAQTHIRVERDLQAARRAGCNRQELQQVVINLL 588

Query: 591 VNAAHAMDGKGRIWVRTYDWVQQDIAIGVKIEVEDEGSGIEPEQLGRIFDPFYTTRKDGT 650
           +NA  AM   G + + T DWV +    GV++ V+D G G+  E L R+F PF+TT+ DG 
Sbjct: 589 INAIQAMPQGGVLRLVTRDWVDEAGRGGVRLWVQDSGPGLSSEVLDRLFRPFFTTKNDGN 648

Query: 651 GLGLSLSYGIIKRIGGTIEVSSV-LGKGSIFTIGLYHE 687
           GLGL +S G+++R GG I   ++  G G+ F + L  E
Sbjct: 649 GLGLWISQGLVERYGGHITAENLSAGSGASFCVALLTE 686