Pairwise Alignments

Query, 709 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 458 a.a., sensory histidine kinase in two-component regulatory system with ZraR from Escherichia coli BL21

 Score =  126 bits (317), Expect = 2e-33
 Identities = 83/232 (35%), Positives = 127/232 (54%), Gaps = 13/232 (5%)

Query: 456 RQQLVTNEKLTALGELTAGIAHEINNPTAVILGNMELL--RYELGDKAEVVKEEIDLVIQ 513
           + ++   EKL ALG L AG+AHEI NP + I G  +    R   G +A  + +   ++ +
Sbjct: 226 QDEMKRKEKLVALGHLAAGVAHEIRNPLSSIKGLAKYFAERAPAGGEAHQLAQ---VMAK 282

Query: 514 QVGRISTIIRSLLQYSRPGEFNAPLEMHPITPIIEEMLVLVRHSIQKQEVVLITELNASC 573
           +  R++ ++  LL+  RP      L+   +  +I   L LV      +E+ L    N + 
Sbjct: 283 EADRLNRVVSELLELVRPTHL--ALQAVDLNTLINHSLQLVSQDANSREIQLRFTANDTL 340

Query: 574 PV-QVNRPQLLQVLINLVVNAAHAMDGKGRIWVRTYDWVQQDIAIGVKIEVEDEGSGIEP 632
           PV Q +  +L QVL+NL +NA  A+   G I V        +   GVKI V D G GI  
Sbjct: 341 PVIQADPDRLTQVLLNLYLNAIQAIGQHGVISVTA-----SESGAGVKISVTDSGKGIAA 395

Query: 633 EQLGRIFDPFYTTRKDGTGLGLSLSYGIIKRIGGTIEVSSVLGKGSIFTIGL 684
            QL  IF P++TT+ +GTGLGL++ + I+++ GGTI+V+S  GKG+ FT+ L
Sbjct: 396 GQLEAIFTPYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGATFTLCL 447